Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4325 ATGGCTACTTGGATAAAAAGCCCCATCTCTGTGTTCTTGTTCTGCTTCTTAACTACACTTGTAGTTGCTGAAACTAGTTCCCATGATGACCCATGCAAAGAATCAAGTTGTGATGGTATTCATGAACCATTCATAAGATTCCCGTTCAGACTCAAAGGAAAACAACCAAAATGGTGTGGCTACAAAAATTCCTGGTTTGAGCTATACTGCACCGATACCAACCAAACAGTTTTCGAACTCCCCTTCTCTACTAAAACCATTGTCAAAACCATAAACTACACTTCACAAGTCATAACAGTATCTTATCCTGAATTCTGCCTTCACAAACAAGTTCCTAATTTCAATATATCCTCATCTCCTTTTCGGTTCAACGATGATTTTGAACTCAGCGAATATGCTTTATTCAATTGTTCAGGGACATCTCACAGGGTCAGAAACGCAGATGATAGTTATCATAATATAATAACATCTGGAAACTTTTCTTGTCTCAGTGTGCCAGGATTTGAAGTTATAGCAGTGGATTCCATGTCACTAATAATTTGGACACCCTTGTTGTCCTGCACCAGAATCCAAAACCTTGTATTGTTGCCTAACTCTTTATTTAACTACAACGTTGATGCTGGTCTTAATTGGTTTCAACCAGATTGCAGAAACTGTGAGCAAAAAGGTGGACAATGCAAGGCCAAAAGAGACACAACTCAACATGAATTCGAATGCATAGGCATCAGTAATGGTTCTTCAAAACGGAAAGTGATTGTTGGTGGAATTTTAGGTCCATTTTCTCTGATATTTGTTGGAGTAGCATCATATTGTATCTATGTAGCTTGCATTGAAAGGAAGAATTACATAAGAATCAAAAAGTTTCTGAAGGATTATAAAGCTGTTAAGCCAGCCAGATACACTTATGCAGATATAAAAAGAATTACAAATCAGTTTAAGGAAGAACTGGGGCAGGGAGCTTTTGGTTCTGTCTACAAAGGAAAGCTATCAAACGAAGTTCAAGTAGCTGTTAAGGTACTAAATTCATCAACAGGAAATGGCCAAGAGTTCATCAATGAAATGGAAGCAATGTGTCAAATTCACCACGTAAACGTGGCTCGCTTGGTTGGCTTTTGTTCGTTACAGAAATTCATATCATCTGCTGACACTAAAGATGTCTTTTTAGGTTGGGAAAGGCTACAAAACATTTCTCTTGGTATAGCTAAGGGGATTGAGTATCTTCATCAAGGTTGTGATAAACGAATTCTCCATTTCGATATCAAACCTCATAATGTATTGCTAGACGACAATTTCACACCCAAAATTTCTGATTTTGGTTTGGCCAAACTTTGTTCCAAGGAAAAAAGTATAGTGTCAATGACCGCAGCTAGGGGAACTTTGGGCTACATTGCGCCAGAGGTATTTTCAAGAAACTTCGGCAATGTATCCTATAAGTCCGATGTTTATAGTTATGGGATGCTGCTTCTCGAAATGGTTGGAGGAAGGAAAATAACCGATGTCACGGCGGAAAATAGCAGTAATGTTCACTATCCACAATGGATTTATAATCTCCTAGAGAACAATGAAGATATAAAAATCGATATAGAAGGAGAAGAAGATACTAAAATTGCAAAGAAGCTATCAATTGTGGGACTTTGGTGCATTCAGTGGCACCCGGCGAATCGTCCGACCATGAAAGCTGTGGTTCAAATGCTGGAAGGAAATGGTGAAAAGTTAGAGATGCCACCTAATCCTTTTGCCTCTGCATCTGCAACTAGAACAAATGCTAGGCGTTTGAACTTGGAGCTAGATGCCATCTCAGAAATAGAGTGA 1812 0.3869 MATWIKSPISVFLFCFLTTLVVAETSSHDDPCKESSCDGIHEPFIRFPFRLKGKQPKWCGYKNSWFELYCTDTNQTVFELPFSTKTIVKTINYTSQVITVSYPEFCLHKQVPNFNISSSPFRFNDDFELSEYALFNCSGTSHRVRNADDSYHNIITSGNFSCLSVPGFEVIAVDSMSLIIWTPLLSCTRIQNLVLLPNSLFNYNVDAGLNWFQPDCRNCEQKGGQCKAKRDTTQHEFECIGISNGSSKRKVIVGGILGPFSLIFVGVASYCIYVACIERKNYIRIKKFLKDYKAVKPARYTYADIKRITNQFKEELGQGAFGSVYKGKLSNEVQVAVKVLNSSTGNGQEFINEMEAMCQIHHVNVARLVGFCSLQKFISSADTKDVFLGWERLQNISLGIAKGIEYLHQGCDKRILHFDIKPHNVLLDDNFTPKISDFGLAKLCSKEKSIVSMTAARGTLGYIAPEVFSRNFGNVSYKSDVYSYGMLLLEMVGGRKITDVTAENSSNVHYPQWIYNLLENNEDIKIDIEGEEDTKIAKKLSIVGLWCIQWHPANRPTMKAVVQMLEGNGEKLEMPPNPFASASATRTNARRLNLELDAISEIE* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4325 603 PANTHER RECEPTOR-LIKE KINASE 23 601 - -
Mal7g4325 603 Pfam Protein kinase domain 312 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4325 603 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Mal7g4325 603 Gene3D Transferase(Phosphotransferase) domain 1 375 574 - -
Mal7g4325 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Mal7g4325 603 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 601 IPR045874 GO:0004672
Mal7g4325 603 SUPERFAMILY Protein kinase-like (PK-like) 295 566 IPR011009 -
Mal7g4325 603 SMART serkin_6 310 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4325 603 ProSiteProfiles Protein kinase domain profile. 310 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4325 603 Gene3D Phosphorylase Kinase; domain 1 273 374 - -
Mal7g4325 603 Pfam Wall-associated receptor kinase galacturonan-binding 32 101 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4325 Mal-Chr7 110346119 110348416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4325 215 602 Receptor kinase-like Gene Family AT1G66910 43.056 1.03e-101 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal7g4325 Pkinase 2.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4325 - - mtr:MTR_4g073230 1033.09