Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4288 ATGGATGCTGCTGATTTAAACACTTTCTTCTTGTTCGGCATCTTCCGTGATGTGCCTGATTACATATTGAAAAAAGTTCTATCTGAGATGGGAGATTGTGCTAGAAAAATGGTTGCACTCAACATCGAAGGATGTGGAATGTTGGAGATGAATGTGTTGCTTCGTATGGTTACCACACTCGATGTAGATGACGATGAATTGGATCAATATTATCAAAGTTCTATTTGTGAACAAAATGTGGGTTGGTCACCGAAATTGAATGTTGAAACTACTTCTTCAAATTCTACCGATCAATGTTCAATTTGTTTGGGGGAGTTTCGCGATGGATCGCAGTCAGAACTCTTTTATACAAGATGCTCTCATGTTTTTCATAAAGAGTGCATTGCCAAGTGGATCTATGGATGTATCGATCGTTCGTCTTCTTATTCTTGTCCATTGTGTCGACATCAGCTAATGTGA 459 0.3878 MDAADLNTFFLFGIFRDVPDYILKKVLSEMGDCARKMVALNIEGCGMLEMNVLLRMVTTLDVDDDELDQYYQSSICEQNVGWSPKLNVETTSSNSTDQCSICLGEFRDGSQSELFYTRCSHVFHKECIAKWIYGCIDRSSSYSCPLCRHQLM* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4288 152 PANTHER RING ZINC FINGER PROTEIN-RELATED 16 151 - -
Mal7g4288 152 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 16 151 - -
Mal7g4288 152 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 152 IPR013083 -
Mal7g4288 152 SMART ring_2 99 147 IPR001841 -
Mal7g4288 152 Pfam Ring finger domain 97 148 IPR001841 -
Mal7g4288 152 SUPERFAMILY RING/U-box 98 151 - -
Mal7g4288 152 ProSiteProfiles Zinc finger RING-type profile. 99 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4288 Mal-Chr7 109934828 109935286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4288 88 152 C3H Transcription Factor Family AT3G43430 39.130 4.26e-09 50.8