Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4280 ATGAAAGTTGCGTTTCAAGATAAGAGGGAAAGTTATTATGAGTTTTTAGAAGTCCTAAAAGATTTCAAGGATCAAAGAATTGATACAAAAGGTACTGCAACAAGAGTGAAGGAGCTGCTTAAAGGGCATACAGATTTAATTTTGGGATTCAACACCTTACTGCCAAAGGAACATCAAATCAAACTTCCATTTCAACTAGAGACCACTGGTAAAAAGGTGAAGAAGGTAGAAGAGAACTGTGAACTTCCTTTCGATGTCCTTGATATCATTTCCAAAACACTAGATTTTGATGACCTCTTTCAGTTTGCTGGTGTGTGCCAGAATTGGAGGGCTTCTCATAAAATTTACTGGAGAAATTTCATGGCATCCCAAGAACCATTACTTCTTCAAGTTTCGTATCATGGTAATGAATCATATTCCTTTATTCGCATATCCGACCAAAAAATTTATTCCTTGAAGATGATGAAGTACTTCTTCAATTTTACTTATGTTACGTCTTCTAGCGGATATTTTATTATGGTGGGGCACAATAATTCATTTATGCTAATCAATCCATTTACAAGGATAAAGAAGGTAATCAATACCTCTACCTTTGAAGTTAAGTCTTGTGATTATGCTAACCATGCCTTGCTTGCTTTTAGCAAATGCTTTGAGGAATTTGTCTTGGTGGATTTATGCAAATATTCAAGGATTTTGCATGTCTATCAATCTCGAAATTGTGGTTGGGTTACTTATTCGACAATGGAAAATTCAGGGAGGGTTGTTGACTTTGTTGTTTTGCATAATATAATATATGTCGTCACTGACAAGGCCAACATTGGGGTACTCAGCTTGAATTCTGCAAATATTAAATTTTTAAAATTGAAGAGTACTCCTGATGTAACAAATTCCTTGTACCTTAGGTTGGTTAATTGTGATGACCAACTTTTAGTGGTTGATTTAAAGTACACTAAACTACGGAATGTGTACAAGATAGACTTTTCAATTATGGATTATGTCAAACTGGAAACTTTGGACGACATTGCATTATTTTATATTTCGAACGGAAGCTGTTATGCATTGAGCAACCCGAGTAGGTGGGGATATGAGAGCAACTCTATGTATATCATTCGTCTTTTATCTACATTATGTAGTGTGTATTCAAGTGATGATAAAAAATTGCGAAAATACATTACCCTTCCAGCTCCTTATGAAACAGGTTCCTCTGTTCATGGAACAAGTTCCTTCATATTGGATTGGTGTTTCAGACATCTACAATATGAAGTAGATTATTCTCTAGTTGAGTGA 1287 0.3504 MKVAFQDKRESYYEFLEVLKDFKDQRIDTKGTATRVKELLKGHTDLILGFNTLLPKEHQIKLPFQLETTGKKVKKVEENCELPFDVLDIISKTLDFDDLFQFAGVCQNWRASHKIYWRNFMASQEPLLLQVSYHGNESYSFIRISDQKIYSLKMMKYFFNFTYVTSSSGYFIMVGHNNSFMLINPFTRIKKVINTSTFEVKSCDYANHALLAFSKCFEEFVLVDLCKYSRILHVYQSRNCGWVTYSTMENSGRVVDFVVLHNIIYVVTDKANIGVLSLNSANIKFLKLKSTPDVTNSLYLRLVNCDDQLLVVDLKYTKLRNVYKIDFSIMDYVKLETLDDIALFYISNGSCYALSNPSRWGYESNSMYIIRLLSTLCSVYSSDDKKLRKYITLPAPYETGSSVHGTSSFILDWCFRHLQYEVDYSLVE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4280 428 ProSiteProfiles F-box domain profile. 76 120 IPR001810 GO:0005515
Mal7g4280 428 SUPERFAMILY PAH2 domain 2 56 IPR036600 GO:0006355
Mal7g4280 428 Gene3D Paired amphipathic helix 1 55 IPR036600 GO:0006355
Mal7g4280 428 PANTHER OS06G0113600 PROTEIN 73 423 - -
Mal7g4280 428 PANTHER OS06G0113600 PROTEIN 73 423 - -
Mal7g4280 428 SUPERFAMILY F-box domain 81 127 IPR036047 GO:0005515
Mal7g4280 428 Pfam F-box domain 81 110 IPR001810 GO:0005515
Mal7g4280 428 ProSiteProfiles PAH domain profile. 1 57 IPR003822 GO:0006355
Mal7g4280 428 Pfam Paired amphipathic helix repeat 10 53 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4280 Mal-Chr7 109788102 109795032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4280 1 62 WRKY Transcription Factor Family AT4G12020 54.839 9.31e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal7g4280 PAH 1e-11 No_clan