Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4249 ATGCAAAGCCTTCGACAATCCCTAAAATCACTTCCCAACGACTGGTCTTCCAATACTCCTTTCTGTAAATGGACCGGCGTTACGTGCTCATCAAACCGCGTCACCGGTATAAACCTTCCCGATCAAAAACTCGCCGGAACCCTTCCCTCCAATCTCAACTCCCTCACTCAACTCACAAATCTCAATCTTCAAAACAACGCTCTCTCTGGTCCTCTTCCTTCTCTCGCCAACCTCTCCTCCCTCCAAACCGTGTATCTCGGTAGTAATAATTTCACCTCCGTCCCTTCCGCCGCATTTGCCGGCCTAAATTCACTCCAAAAACTCTTCCTCGGATATAACACCAACCTCTCTCCATGGGCATTCCCTACCGAGTTGTCTCAGTCTTCCAACCTCAACATACTCGATATCGATCAAGCAAATATCAACGGAACCTTACCAGACATTTTCGGTAGTTTCTCCAGTCTCACCGAAATTCGTCTCTCATACAACAAACTCACCGGAGAATTACCTAACTCTCTCGCCGGTTCTGTAATTCAGAGGTTTTGGCTCAATAACAACAGCCCCGGTTTAACCGGTTCAATCGCCGTGATTTCCAACATGACCGCGTTAACTCAGGTATGGCTTCATGTGAATAAGTTCACTGGTCCAATTCCAGATTTATCGCAATGCAAGAGTATATATGATCTGAAACTTAGGGATAATCAGTTAACTGGTGTGGTTCCTGATTCTCTCATGAGTATGCCTAGCTTGAAGAATGTTACTCTGAGAAATAATGAGCTTCAGGGACCTGTTCCAGTTTTTGGTAAAGATGTGGATTTTCCTCCTGAAGATAGCAAAGGTTTTTGTCTTGATAAACCTGGACCTTGTGATGCTAGGGTTATGGTTTTGCTTCAAATTGCTGAGGGATTTGGGTATCCCCTTCAATTGGCCAAGTCGTGGAAAGGGAATGATCCTTGTAAAGGTTGGATGTGTGTTACATGTGGTGGTGGGGATAAGATTACGACCTTGAATTTCGGGAAGCAGAGTTTGCAGGGAACAATTTCGCCTGCTTTTGCCAATTTGACTGATTTGAAGAATTTGTTTTTAAGTGGGAATAGTTTGACTGGTTCTATACCTGAGAGTTTGACTACATTGTCTCAGCTTGAGACTCTTGATGTCTCTAACAATAACCTCTCAGGCAAGGTTCCCAATTTTTCACCAAAGGTGAAGTTTTTAACTGATGGTAATGTTTGGCTTGGTAAAAATCCTGATCCTGGTTCTGCTCCCAGTGCAAGTCCTGCTGGATCGGGAAAAGGTGCTTCGATGAGCCCAGGTTGGATTGCTGGTATAGTGATTGTTGTTGTTGTTGCGGGGCTGTTGTTTGTTTATTGGAAGTGTTGTCATTCCAGAATACGGCTTAGGAAATTCGCAAGGGTTGGTAATCCTGAAAATGGGGAAGGAAATGTTAAAATTGATCTTGCGAGTGTTTCGAATGGATATGGTGGTGCTTTGAGCGAGTTGCAAAGCCAGAGCAGTGGTGATCATAGTGATCTTCACGGTTTTGATGGAGGAAGTGGTGGAAATGCTACGATTTCGATTCATCTTCTTCGACAAGTGACAAATGATTTCAGCGACGATAACATTTTGGGAAGGGGAGGGTTTGGTATTGTTTATAAAGGGGAGTTACCTGATGGAACTAAAATTGCTGTCAAGAGGATGATATCCGTTGCAAGGGGAAGCAAAGGGTTGAATGAGTTTGAAGCAGAGATTGGTGTTCTTACTAAGGTTAGGCATAGACATTTGGTTGCCCTTTGGGGATATTGCATCAATGGCAATGAGAGGCTTTTGGTGTATGAGCATATGCCTCAAGGGACATTAACGCAACATCTGTTTGAATGTCGTGAACATGGGTACACTCCTTTGACATGGAAACAAAGGTTGATAATAGCTTTGGATGTTGGACGGGGGGTGGAATACCTGCACAGCTTAGCTCAGCAAACCTTCATTCATAGAGACTTAAAACCATCAAATATACTATTAGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGGTTGGTTAAAAACGCACCGGACGGAAATTATTCTGTTGAGACAAAGTTGGCTGGAACATTTGGTTATCTTGCACCCGAGTATGCAGCTACTGGAAGAGTGACAACCAAAGTGGATGTTTATGCATTTGGAGTAGTTTTGATGGAACTGATCACAGGTAGAAAGGCATTAGATGATACTGTGCCTGATGAAAGTTCTCATTTGGTTACATGGTTCCGTAGGGTACTGACTAACAAGGAAAACATTCCAAAGGCAATTGATCAAACTCTCGACCCGGACGAGGAAACAATGTTGAGCATATATAAAGTGGCTGAGCTGGCTGGCCATTGCACCGCTCGTTCACCATACCAAAGGCCAGATATGGGGCATGCAGTGAATGTGTTATGTCCTCTTGTGAAGCTATGGGAACCTACTACCAACACAGACGAAAGTATTTGTGCGGTTGACAATCAGATGAGTCTTCCTCAAGCACTACAAATGTGGCAAGCCAATGAAGGCACTTCGACATTCTTCAATGGCATGTCCTCGCAAACCCAATCAAGTTTCAAATCTAAACCTCCAGTGTTTGCAGATTCCCTTCATTCACCTGATTGCCGGTAG 2652 0.4389 MQSLRQSLKSLPNDWSSNTPFCKWTGVTCSSNRVTGINLPDQKLAGTLPSNLNSLTQLTNLNLQNNALSGPLPSLANLSSLQTVYLGSNNFTSVPSAAFAGLNSLQKLFLGYNTNLSPWAFPTELSQSSNLNILDIDQANINGTLPDIFGSFSSLTEIRLSYNKLTGELPNSLAGSVIQRFWLNNNSPGLTGSIAVISNMTALTQVWLHVNKFTGPIPDLSQCKSIYDLKLRDNQLTGVVPDSLMSMPSLKNVTLRNNELQGPVPVFGKDVDFPPEDSKGFCLDKPGPCDARVMVLLQIAEGFGYPLQLAKSWKGNDPCKGWMCVTCGGGDKITTLNFGKQSLQGTISPAFANLTDLKNLFLSGNSLTGSIPESLTTLSQLETLDVSNNNLSGKVPNFSPKVKFLTDGNVWLGKNPDPGSAPSASPAGSGKGASMSPGWIAGIVIVVVVAGLLFVYWKCCHSRIRLRKFARVGNPENGEGNVKIDLASVSNGYGGALSELQSQSSGDHSDLHGFDGGSGGNATISIHLLRQVTNDFSDDNILGRGGFGIVYKGELPDGTKIAVKRMISVARGSKGLNEFEAEIGVLTKVRHRHLVALWGYCINGNERLLVYEHMPQGTLTQHLFECREHGYTPLTWKQRLIIALDVGRGVEYLHSLAQQTFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGNYSVETKLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKALDDTVPDESSHLVTWFRRVLTNKENIPKAIDQTLDPDEETMLSIYKVAELAGHCTARSPYQRPDMGHAVNVLCPLVKLWEPTTNTDESICAVDNQMSLPQALQMWQANEGTSTFFNGMSSQTQSSFKSKPPVFADSLHSPDCR* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4249 883 Pfam Leucine rich repeat N-terminal domain 3 30 IPR013210 -
Mal7g4249 883 Pfam Leucine rich repeat N-terminal domain 295 327 IPR013210 -
Mal7g4249 883 CDD STKc_IRAK 542 815 - -
Mal7g4249 883 Gene3D Transferase(Phosphotransferase) domain 1 614 834 - -
Mal7g4249 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Mal7g4249 883 Gene3D Phosphorylase Kinase; domain 1 503 613 - -
Mal7g4249 883 Gene3D Ribonuclease Inhibitor 1 279 IPR032675 -
Mal7g4249 883 Pfam Protein tyrosine and serine/threonine kinase 540 806 IPR001245 GO:0004672|GO:0006468
Mal7g4249 883 ProSitePatterns Protein kinases ATP-binding region signature. 542 564 IPR017441 GO:0005524
Mal7g4249 883 Pfam Leucine rich repeat 80 116 IPR001611 GO:0005515
Mal7g4249 883 Pfam Leucine rich repeat 333 391 IPR001611 GO:0005515
Mal7g4249 883 ProSiteProfiles Protein kinase domain profile. 536 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4249 883 PANTHER OSJNBA0070M12.3 PROTEIN 1 877 - -
Mal7g4249 883 SMART serkin_6 536 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4249 883 PANTHER RECEPTOR-LIKE KINASE TMK4 1 877 - -
Mal7g4249 883 SUPERFAMILY L domain-like 7 399 - -
Mal7g4249 883 MobiDBLite consensus disorder prediction 858 883 - -
Mal7g4249 883 Gene3D Ribonuclease Inhibitor 291 415 IPR032675 -
Mal7g4249 883 SUPERFAMILY Protein kinase-like (PK-like) 524 839 IPR011009 -
Mal7g4249 883 ProSiteProfiles Leucine-rich repeat profile. 57 79 IPR001611 GO:0005515
Mal7g4249 883 SMART LRR_typ_2 354 377 IPR003591 -
Mal7g4249 883 SMART LRR_typ_2 152 175 IPR003591 -
Mal7g4249 883 SMART LRR_typ_2 378 400 IPR003591 -
Mal7g4249 883 SMART LRR_typ_2 78 101 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4249 Mal-Chr7 109369091 109372583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4249 34 812 Receptor kinase-like Gene Family AT5G07280 30.498 2.72e-86 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mal7g4249 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4249 - - gmx:100286794 1157.13