Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4236 ATGGAAGAGGATTTCGAGTTTCCAACAGCAGGAGAGATGGAAATGCCAGAGGAAGAGGAGGTGATGAGTCCGATCCAGAAGGTTGGTGAGGAGAAGGAGATTGGGAAGAATGGTTTGAAGAAGAAGCTTGTTAAGGAAGGTGAAGGCTGGGAAACTCCTGATAATGGAGATCAAGTTGAAGTGCATTATACCGGAACTTTGCTTGATGGAACAAAATTTGATTCGAGTCGTGATAGGAGTACCACTTTCAAGTTTAAGCTTGGTCAAGGGCAAGTGATCAAAGGATGGGATGAAGGTATCAAAACCATGAAGAAGGGTGAAAATGCAATTTTTACAATACCTCCAGAATTGGCTTATGGGGAATCTGGGTCTCCTCCTACTATTCCCTCAAATGCAGCTCTTCAGTTTGATGTGGAGTTACTGTCTTGGACAAGTGTCAAAGACATTACCAAGGATGGTGGAATATTGAAGAACATAATAACTGAAGGGGAGAAATGGGACAATCCTAAGGACCTCGATGAAGTATTTGTTAAGTATGACGCTCGTCTCGAAGATGGAACAATTATTTCAAAATCTGACGGGGTCGAGTTCACTGTTGAAGAGGGTTATTTCTGTCCTGCTTTGGCTAAGGCTGTGAAAACAATGAAGAAGGGAGAAAAAGTTCTCTTGAATGTTAAGCCAGAATATGCATTTGGTGAGAGTGGAAAACCTTCCTCAGGAAATGATGGTGCCGTACCTCCAAATGCTTCACTCCAAATAGATCTCGAGTTAGTTTCGTGGAAGGCTGTATCTGACATAACTAAGGATAGGAAGGTCCTTAAGAAAACTTTGAAGGAAGGAGAGGGATATGAACGACCAAATGATGGAGCTGTAGTTCAGGTGAAACTTATTGGGAAGCTGCAAGATGGGACTGTCTTCCTTAAGAAGGGTCATGATGATGATCAGCCATTTGAATTCAAAATTGATGAAGAGCAAGTAATTGATGGACTTGATAGAGCTGTGAAGAACATGAAGAAAGGGGAAACTGCATTGGTGACCATACAACCGGAGCATGCTTTTGGTCCATCTGGGTCGCCTCTGGAATTGGCTACCGTTCCTCCCAATTCCACTGTTTACTATGAAGTTGAGCTACTTTCCTTTGTAAAGGAAAAGGAATCATGGGATCTTAATACGCAAGAGAAGATTGAGGCAGCTGGAAAGAAGAAGGAAGAAGGGAATGCATTGTTCAAAGCTGGTAAACATGAAAGAGCGTCAAAGAGATATGAGAAGGCCATAAGGTATATTGAGTACGATTCCTCCTTCAGTGATGAGGAAAAACAGCAGGCCAAAGCATTGAAAATTTCATGCAATCTTAACGACGCGGCATGTAAGTTGAAACTCAAGGACTACAAACAGGCAGAGAAGTTGTGCACAAAGGTGTTAGAGCTTGATAGTAGAAATGTAAAAGCATTATACCGGAGGGCACAGGCATATATTCACCTTGTTGACTTGGATTTGGCTGAAATGGATATTAAGAAAGCCCTTGAAATTGATCCAGATAACAGGGATGTGAAGATTGAGTACAAAATATTGAAGGACAAAGTGAGAGAATACAACAAGAAGGATGCACAATTTTATGGCAATATATTTGCCAAAATGAATAAAGTGGAACAAGCTAGAACTGCAGCAGCAAAGCAGGAGTCTGTGCCGATGGCTGTCGATAGTAAAGCATAA 1713 0.4168 MEEDFEFPTAGEMEMPEEEEVMSPIQKVGEEKEIGKNGLKKKLVKEGEGWETPDNGDQVEVHYTGTLLDGTKFDSSRDRSTTFKFKLGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPSNAALQFDVELLSWTSVKDITKDGGILKNIITEGEKWDNPKDLDEVFVKYDARLEDGTIISKSDGVEFTVEEGYFCPALAKAVKTMKKGEKVLLNVKPEYAFGESGKPSSGNDGAVPPNASLQIDLELVSWKAVSDITKDRKVLKKTLKEGEGYERPNDGAVVQVKLIGKLQDGTVFLKKGHDDDQPFEFKIDEEQVIDGLDRAVKNMKKGETALVTIQPEHAFGPSGSPLELATVPPNSTVYYEVELLSFVKEKESWDLNTQEKIEAAGKKKEEGNALFKAGKHERASKRYEKAIRYIEYDSSFSDEEKQQAKALKISCNLNDAACKLKLKDYKQAEKLCTKVLELDSRNVKALYRRAQAYIHLVDLDLAEMDIKKALEIDPDNRDVKIEYKILKDKVREYNKKDAQFYGNIFAKMNKVEQARTAAAKQESVPMAVDSKA* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4236 570 PANTHER PEPTIDYLPROLYL ISOMERASE 271 380 - -
Mal7g4236 570 PANTHER PEPTIDYLPROLYL ISOMERASE 1 267 - -
Mal7g4236 570 PANTHER PEPTIDYLPROLYL ISOMERASE 381 551 - -
Mal7g4236 570 ProSiteProfiles TPR repeat profile. 481 514 IPR019734 GO:0005515
Mal7g4236 570 Gene3D - 147 261 IPR046357 GO:0003755
Mal7g4236 570 SMART tpr_5 398 431 IPR019734 GO:0005515
Mal7g4236 570 SMART tpr_5 447 480 IPR019734 GO:0005515
Mal7g4236 570 SMART tpr_5 481 514 IPR019734 GO:0005515
Mal7g4236 570 Gene3D - 262 383 IPR046357 GO:0003755
Mal7g4236 570 SUPERFAMILY FKBP-like 146 264 - -
Mal7g4236 570 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 271 380 - -
Mal7g4236 570 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 267 - -
Mal7g4236 570 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 381 551 - -
Mal7g4236 570 Gene3D - 31 146 IPR046357 GO:0003755
Mal7g4236 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755
Mal7g4236 570 Coils Coil 514 534 - -
Mal7g4236 570 SUPERFAMILY FKBP-like 33 148 - -
Mal7g4236 570 Pfam Tetratricopeptide repeat 458 514 - -
Mal7g4236 570 Gene3D Tetratricopeptide repeat domain 384 541 IPR011990 GO:0005515
Mal7g4236 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755
Mal7g4236 570 SUPERFAMILY TPR-like 387 547 IPR011990 GO:0005515
Mal7g4236 570 SUPERFAMILY FKBP-like 264 398 - -
Mal7g4236 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 51 141 IPR001179 GO:0003755
Mal7g4236 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 169 258 IPR001179 GO:0003755
Mal7g4236 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 378 IPR001179 GO:0003755
Mal7g4236 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 381 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4236 Mal-Chr7 109268847 109272054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4236 15 570 Calmodulin-binding Proteins AT5G48570 73.750 0.0 845