Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4203 ATGTACTTTGAGGCTGTATGTCCAGAAAGTGATTCCAAAAACCTTTCTTTTTCAAGGGATCTCAACTCATCTTTAAGTATTCTAAAGAAGTGTAAGTCCACTGGTCAGAACTTACAATGTCCGCCGCGTTGCCAGGTTGAAGGTTGTGGTCTTGATCTTTCATCCGCTAAAGATTATTATCGCAAACATAGAGTTTTTGATAGACATTCCAAATCTCTTAAGGTGGTTATAGATGGTTTGGAACGTCGATTTTGCCAAAAATGTAGCAGGTTCTGTGATCTGTTTGAGTTCGATGAAAAAAAGAAAAGCTGCAGACGCCGTCTTTTACATCACAATGCAAGGGGCCGTCTTTTACCCAATATGATTCCAATGGTAAAATAG 381 0.3911 MYFEAVCPESDSKNLSFSRDLNSSLSILKKCKSTGQNLQCPPRCQVEGCGLDLSSAKDYYRKHRVFDRHSKSLKVVIDGLERRFCQKCSRFCDLFEFDEKKKSCRRRLLHHNARGRLLPNMIPMVK* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4203 126 SUPERFAMILY SBT domain 41 117 IPR036893 GO:0003677|GO:0005634
Mal7g4203 126 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 1 116 IPR044817 GO:0003677
Mal7g4203 126 ProSiteProfiles Zinc finger SBP-type profile. 41 118 IPR004333 GO:0003677
Mal7g4203 126 Gene3D - 35 105 IPR036893 GO:0003677|GO:0005634
Mal7g4203 126 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 2 1 116 - -
Mal7g4203 126 Pfam SBP domain 44 116 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4203 Mal-Chr7 109009241 109009821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4203 21 124 SBP-box Gene Family AT1G27370 61.538 8.17e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mal7g4203 SBP 7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4203 - - lja:Lj0g3v0057709.3 157.147