Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4202 ATGTACTTTGAGGCTGTATGTCCAGAAAGTGATTCAAAAAACCTTTCTTTTTCAAGGGATCTCAACTCATCTTTAAGTATTCCAAAGAAGTGTAAGTCCACTGGTCAGAACTTACAATGTCCGCCGCGTTGCCAGGTTGAAGGTTGTGGTCTTGATCTTACATCCGCTAAAGATTATTATCGCAAACATAGAGTTTGTGATAGACATTCCAAATCTCTTAAGGTGGTTATAGATGGTTTGGAACATCGATTTTGCCAAAAATGTAGCAGGTTCCATGATCTGTTTGAGTTCGATGAAAAGAAGAGAAGCTGCAGACGACAACTTTCAAATCATAATGCAAGGCGCCGTAAATATCATCATCGTGAAGCTTTCCAATCAAGTCAATCAGCTTTGTCTTATTCATGCAGCCATGGAAAGCAACAGATGAGTCCATTTGCTTATTCAAAAACTGCTACAAATTTAGCCTGCCAAAACACACACAACAACAAGCTCTCCCAAACAAAATATTTTCTCTCGAAGCCAGCCAAAGACAACATTGACACACCAAGCACTGTCACTATGCTTTCTGATGATTCCAATGTCCTTGAAACCAAGAGTATCGATACAGGTGATGAAGATTTCATTAACTTCTCTAATACAGAAGCTACACAAGACGTTACTTGTGCTCTCTCTCTTCTGTCAACCAAGCCCCCGTGGGATTCATATGCGACCAAATCCATTTCTCTAGAACATTCTAGTCGCACAGCCAGAAACGCTCAAGCCATAACACATGCAATGAGTCTGCGCATGCCTCTTATTTCATCAGAATCATGGTATAGTGATCATGATCAGCAAGTCAATTCCAGCATGAGGATCTCAAACTCAAACTGTGAAGACAACAATCACTTTTAA 891 0.4018 MYFEAVCPESDSKNLSFSRDLNSSLSIPKKCKSTGQNLQCPPRCQVEGCGLDLTSAKDYYRKHRVCDRHSKSLKVVIDGLEHRFCQKCSRFHDLFEFDEKKRSCRRQLSNHNARRRKYHHREAFQSSQSALSYSCSHGKQQMSPFAYSKTATNLACQNTHNNKLSQTKYFLSKPAKDNIDTPSTVTMLSDDSNVLETKSIDTGDEDFINFSNTEATQDVTCALSLLSTKPPWDSYATKSISLEHSSRTARNAQAITHAMSLRMPLISSESWYSDHDQQVNSSMRISNSNCEDNNHF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4202 296 ProSiteProfiles Zinc finger SBP-type profile. 41 118 IPR004333 GO:0003677
Mal7g4202 296 Pfam SBP domain 44 117 IPR004333 GO:0003677
Mal7g4202 296 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 1 288 IPR044817 GO:0003677
Mal7g4202 296 SUPERFAMILY SBT domain 42 120 IPR036893 GO:0003677|GO:0005634
Mal7g4202 296 Gene3D - 35 105 IPR036893 GO:0003677|GO:0005634
Mal7g4202 296 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 2 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4202 Mal-Chr7 109002190 109009148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4202 21 117 SBP-box Gene Family AT1G27370 67.010 9.12e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mal7g4202 SBP 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4202 - - mtr:MTR_8g080670 347.436