Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4187 ATGGACGCGGCGGTCTTCTTTGAATCCGAATATCGTCCTCTTGCTCCTCTGGTTCAGGCCAAACGCAAGATCGACGACACAGCGGTCTCCTCTGAATCCGAATATAGTGCTCTTGATCTCAAATGGTTGTATGAAGGTCCCGAATGGCCGCTTTTTCTTCATGATCTACGTTTCCACCTTTATGATTGCTCTCATCATCACCAAAACATTGGTTCTGATTATAGACCAACAGATTTAACTGTTGGAGGATGTTTTTATGTACCTATCTTTATGAAATCTTTCGTGGAGGAGATGACTTCTGATTCTGGGCCCTATAATGACAAGACCAATTCTGTTGTGGTAACCAACCTCCCGCTCCGCACATGTGACTCTGAATTATTTGAGCTTTTCCGTCCTTTTGGTGCGACCCTTGCTCATGCTGCTAGTACTAAAGACGTTGAGTTTTATGGCTGCTTTGGCTTTGTTAACTTTGCCACCAGGGAACAAGCTCAGAAGGCTGTTGATAATGGGGGGTTTGTCTACCGCAATCACCCCCTTGGAGTTGAATGGGTCACCCCAAAAACAACCTAA 570 0.4526 MDAAVFFESEYRPLAPLVQAKRKIDDTAVSSESEYSALDLKWLYEGPEWPLFLHDLRFHLYDCSHHHQNIGSDYRPTDLTVGGCFYVPIFMKSFVEEMTSDSGPYNDKTNSVVVTNLPLRTCDSELFELFRPFGATLAHAASTKDVEFYGCFGFVNFATREQAQKAVDNGGFVYRNHPLGVEWVTPKTT* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4187 189 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 82 189 - -
Mal7g4187 189 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 82 189 - -
Mal7g4187 189 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 112 176 IPR000504 GO:0003723
Mal7g4187 189 SUPERFAMILY RNA-binding domain, RBD 97 187 IPR035979 GO:0003676
Mal7g4187 189 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 110 186 IPR000504 GO:0003723
Mal7g4187 189 SMART rrm1_1 111 182 IPR000504 GO:0003723
Mal7g4187 189 Gene3D - 94 189 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4187 Mal-Chr7 108756015 108756997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4187 86 188 Eukaryotic Initiation Factors Gene Family AT5G06000 44.860 1.97e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4187 K03248 - fve:101304537 76.6405