Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4147 ATGGTGCACAACAGGTCTCTTCTCTCTGACAATAAGGATAATGCTTTCTTTCCCTCTCCACACCTTGATGCTTTTCCAGCTGGTCTTCGAGTTCTCGTTGTTGATGATGATCCAACTTGGCTTAGAATCCTTGAAAAAATGCTCAAAAAATGCTTTTACCGAGTGACCACATGTAGTTTAGCAGCAGAGGCTCTTAAGAAGCTTCGTGAAAGGAAAGATGCATATGACATAGTGATCAGCGATGTAAACATGCCTGACATGGATGGTTTCAAGCTTCTTGAGCATGTTGGACTTGAGATGGATATTCCTGTCATTATGATGTCTGTTGATGGAGAAACAAGCAGGGTGATGAAAGGTGTTCAACATGGAGCATGTGATTATTTGCTTAAGCCTATAAGGATGAAAGAATTGCGAAACATATGGCAACATGTCTTAAGAAAAAGAATACATGAGGCAAGAGAATTTGAAAGTCTTGAAGGAATTCACTTAATGAGAAATGGATCAGATCACACTGGTGATGGTAACATGTTTGCTGTAGGAGAAGAAATGAACTTAATGAAGAAAAGGAAAGATTTGGATAATAAACATGAAGACAAAGAATTTGGAGATCAAACTTCTATAAAGAAAGCTAGAGTAGTTTGGTCTGTGGATCTTCATCAGAAGTTTGTTAAAGCAGTGAATCAGATTGGATTCGATAAAGTTGGTCCCAAGAAAATTCTAGATTTGATGAATGTTCCATGGCTGACTAGAGAAAATGTTGCTAGTCACTTGCAGAAATATCGACTCTACTTAAGTAGGTTGCAAATGGAAAATAGTCAGAAATCTTCCTCAAGTGGAATAATGCATTCAGATTCATTTTCAAAATATTCAGGATGTTTAAGTTTTCTCAACAAGCAACAAAATGATGTCGCGATTGAATCCTTCATACCAACACAATACTTATGGAATGAAGTTCCGAAAAGGCCACACAAAGAACAGAACACACTTGTACAATCAAAAGATAGCTTCATCCATTTGCCATTAAATGTTACACAACAACACTTTCAAGTTGACCAATCACAGTCAATTAATTTCAATCCCTCCGATTACAAGAGTGATTACATTAGTCCTGCGAATTCAGCGGTATCTACAGTTGACACCTTTCATTGTCAGTCCAAAAGCCTCATGTTGAATGATCAATCTCCTGATATCATTTTCACTTCAAATTTGAGTTCAAAAACACCAGAATTTAATCTTGGTTGCATTTCTGATATGGAAATTTACCGAAGAAACTTACTTTTGGGTATTGAGCCAGCTTCAACACCTTTGAATGAGGACTTAAATTTCTTTTTGTTACAAGGTGAATACTATGATATGATATGA 1362 0.3656 MVHNRSLLSDNKDNAFFPSPHLDAFPAGLRVLVVDDDPTWLRILEKMLKKCFYRVTTCSLAAEALKKLRERKDAYDIVISDVNMPDMDGFKLLEHVGLEMDIPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKRIHEAREFESLEGIHLMRNGSDHTGDGNMFAVGEEMNLMKKRKDLDNKHEDKEFGDQTSIKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQMENSQKSSSSGIMHSDSFSKYSGCLSFLNKQQNDVAIESFIPTQYLWNEVPKRPHKEQNTLVQSKDSFIHLPLNVTQQHFQVDQSQSINFNPSDYKSDYISPANSAVSTVDTFHCQSKSLMLNDQSPDIIFTSNLSSKTPEFNLGCISDMEIYRRNLLLGIEPASTPLNEDLNFFLLQGEYYDMI* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4147 453 Gene3D - 205 268 - -
Mal7g4147 453 CDD REC_typeB_ARR-like 31 145 - -
Mal7g4147 453 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 281 - -
Mal7g4147 453 PANTHER TWO-COMPONENT RESPONSE REGULATOR 300 451 IPR045279 GO:0009736
Mal7g4147 453 PIRSF RR_ARR_type-B 6 424 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mal7g4147 453 Gene3D - 29 195 - -
Mal7g4147 453 Pfam Response regulator receiver domain 31 140 IPR001789 GO:0000160
Mal7g4147 453 PANTHER TWO-COMPONENT RESPONSE REGULATOR 300 451 - -
Mal7g4147 453 SMART REC_2 29 141 IPR001789 GO:0000160
Mal7g4147 453 SUPERFAMILY CheY-like 28 156 IPR011006 -
Mal7g4147 453 SUPERFAMILY Homeodomain-like 206 266 IPR009057 -
Mal7g4147 453 ProSiteProfiles Response regulatory domain profile. 30 145 IPR001789 GO:0000160
Mal7g4147 453 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 281 IPR045279 GO:0009736
Mal7g4147 453 Pfam Myb-like DNA-binding domain 211 261 IPR001005 -
Mal7g4147 453 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 209 262 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4147 Mal-Chr7 108301215 108304053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4147 22 275 Response Regulator Gene Family AT2G25180 55.385 3.86e-85 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal7g4147 Response_reg 1.7e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4147 - K14491 gmx:100778324 504.212