Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4135 ATGGGTGAAGAAAAGCAACAGAGTATTCCTGCTTTGCCATGGATGCGAGACCCCGTTGACGTCTCTCTCTCTCAAGAACTTCCCCTTCATTCCGTCCCTTCTCTCCACCCTAAGTTGAAATCAGCATTGGAGGACATGGGAATCTCAAACCTATTCCCAGTTCAAGTTGCAGTATGGCACGAAACAGTTGGCCCTGGCAATTTCGAACGAGACATTTGCGTTAATTCACCCACCGGAAGCGGAAAAACCCTCGCCTACGCTCTCCCCTTAGTGCAGATGCTATCAAATCGCGTCACAAAATGCCTCCTCCGTGCCTTGGTTGTTGTCCCCACTCGCGACCTTGCTTTGCAGGTCAAACAAGTCTTTGATTCCGTTGCATCTCCGTTAGGTCTGCGCGTTGGATTAGCCGTCGGGCAATCATCTTTCTCCGATGAGATTTCTGAGCTTGTTGAAATGCAAGCACGTGATATAGGCATGTGCTATGATCCGCATTGCGTTTCGCGTCCTCGCTTTCAGAGTAAAGTTGATATATTGGTAGCAACCCCTGGTAGGCTTATGGATCACATTAATACGACCATTGGTTTCACGCTTGAGCATCTTTATTATCTTGTGGTTGATGAAACAGATCGATTACTTCGTGAGGCATACCAATCATGGTTGCCTACTGTGCTTGAACTGATCCATTCTAACGATGAGGGTTTTTTCCAACCGTCTGATTCTTTTTTCCCGTGTTCTGTTGGTGCATTAAGAACCAGAAGAAGATGTGGAGTTGAGAGGGGCTTCAAGGACAAGCCTTATCCCAGGCTAGCAAAGATGGTTCTATCTGCGACATTAACTCAGGATCCAGGCAGGCTTATTCAGCTTAATTTGCACCACCCTTTATTATTGAAAGCTGGACAAATGCGTTATCGGCTCCCAGAAAATTTGGAATCTTATAAACTGATTTGTGAAACAAAGGTCAAACCCTTATATTTAATTGCCCTTTTGAAATCCCTGGGAGAAGAAAAATGCCTAGTTTTTACAAAATCTGTGGATTCAACACATCGTCTCTGCCAATTGCTAAATTGTATTGAAGATCTGCAAATTGATATCAAGGAGTATTCTGGTTTACAACATCAACGTGTAAGAAGCAAGACATTGAACGAATTTCGAAAAGGGGTGTTTCAAGTGCTTGTATCTTCTGATGCATTGACTCGTGGAATGGATGTTGAAGGGGTAAGAAATGTCATTAATTATGACGTGCCAAAATTCATAAAAACTTATGTCCATCGGGCGGGTAGGACTGCAAGAGCAGGCCAAACTGGGCGTTGCTTCACATTAATGTCAGAAGATGAGGTTCGACGATTTAAGAAGTTAATGCGAAAGGCTGAGGGTGGTTCTTGTCTGGACCATATCGTTCCGTCCAGTCAAATTGAAGCACTCAATACTACCTACCAATCAGCACTGACAAAATACAAAGAGATAATTTCGAAGACACGAAAGAAACCCAAGAATTAA 1497 0.4369 MGEEKQQSIPALPWMRDPVDVSLSQELPLHSVPSLHPKLKSALEDMGISNLFPVQVAVWHETVGPGNFERDICVNSPTGSGKTLAYALPLVQMLSNRVTKCLLRALVVVPTRDLALQVKQVFDSVASPLGLRVGLAVGQSSFSDEISELVEMQARDIGMCYDPHCVSRPRFQSKVDILVATPGRLMDHINTTIGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELIHSNDEGFFQPSDSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLPENLESYKLICETKVKPLYLIALLKSLGEEKCLVFTKSVDSTHRLCQLLNCIEDLQIDIKEYSGLQHQRVRSKTLNEFRKGVFQVLVSSDALTRGMDVEGVRNVINYDVPKFIKTYVHRAGRTARAGQTGRCFTLMSEDEVRRFKKLMRKAEGGSCLDHIVPSSQIEALNTTYQSALTKYKEIISKTRKKPKN* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4135 498 Gene3D - 307 498 IPR027417 -
Mal7g4135 498 CDD SF2_C_DEAD 309 440 - -
Mal7g4135 498 SMART helicmild6 351 432 IPR001650 -
Mal7g4135 498 PANTHER RNA HELICASE 27 477 - -
Mal7g4135 498 PANTHER ATP-DEPENDENT RNA HELICASE DDX51 27 477 - -
Mal7g4135 498 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 324 474 IPR001650 -
Mal7g4135 498 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 63 296 IPR014001 -
Mal7g4135 498 CDD DEADc_DDX51 39 296 - -
Mal7g4135 498 Gene3D - 20 299 IPR027417 -
Mal7g4135 498 SMART ultradead3 47 312 IPR014001 -
Mal7g4135 498 Pfam DEAD/DEAH box helicase 53 282 IPR011545 GO:0003676|GO:0005524
Mal7g4135 498 Pfam Helicase conserved C-terminal domain 321 432 IPR001650 -
Mal7g4135 498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 453 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4135 Mal-Chr7 108137830 108142463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4135 71 447 Eukaryotic Initiation Factors Gene Family AT3G13920 23.438 1.16e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4135 K14807 - csv:101217879 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4135 7 108137830 108142463 Mal7g4135 7 108137830 108142463 ECH