LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g4103	ATGAGGAACAAGAATATGAACTTGGAACTTCGTCTTTTCCCTCCTTCCATTTCTGATCTTTGTCCCACAATGAAAGAAAAAGAAGAAGAAGCAAGTGAGAGTCCACTACAAGATCATCATCATCATCATCATCAGTACCGACCGTTGACCATTGTCTATGATGGCAAGGTTTGCGTTCATGATGCCACAGAGATTCAGGCTAGGTCTATTTTAATGCTTGCAAATAAAGAAATGGAGGAAAGAGTGAGGACACCAACTGGATCATCATCTTCACCATCTTCACCATCAGTGTTTAACTTGTATAGCCCTAGCACTTCTCTTTCCATGCAAAAATCGCTGCAGAGGTTTCTCCAAAAGAGGAAGAATCGGATCCAAGAAGCATCCCCTTACCATCTTAAGATAAATGAGCAAAATTAA	417	0.4053	MRNKNMNLELRLFPPSISDLCPTMKEKEEEASESPLQDHHHHHHQYRPLTIVYDGKVCVHDATEIQARSILMLANKEMEERVRTPTGSSSSPSSPSVFNLYSPSTSLSMQKSLQRFLQKRKNRIQEASPYHLKINEQN*	139

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g4103	138	PANTHER	PROTEIN TIFY 4A-RELATED-RELATED	4	130	IPR040390	-
	Mal7g4103	138	MobiDBLite	consensus disorder prediction	24	40	-	-
	Mal7g4103	138	Pfam	Jas motif	111	130	IPR018467	-
	Mal7g4103	138	Pfam	tify domain	47	75	IPR010399	-
	Mal7g4103	138	PANTHER	-	4	130	-	-
	Mal7g4103	138	MobiDBLite	consensus disorder prediction	80	102	-	-
	Mal7g4103	138	ProSiteProfiles	Tify domain profile.	42	76	IPR010399	-
	Mal7g4103	138	MobiDBLite	consensus disorder prediction	84	102	-	-
	Mal7g4103	138	MobiDBLite	consensus disorder prediction	24	43	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g4103	Mal-Chr7	107666537	107668727	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal7g4103	4	131	Tify Gene Family	AT1G30135	41.221	8.91e-21	80.1

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	Tify	Mal7g4103		tify	4.2e-08	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g4103	-		-	gmx:100781356	150.599

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal7g4103	7	107666537	107668727	Mal7g4103	7	107666537	107668727	ECH