Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4087 ATGGACAAATCCCATAGCTTTCTTCACAGTCTTCTTAAACACTTCAAATGCGGTTACAACGCAGAGGGAAACAATGAAGCTGAGTTACAAAAAATGGCTTCACGGGAGCAGAAAATATTTTCTTATGAAACCCTGCTTTCTGCCACCAAGAATTTTAATGCTACTCATAAATTAGGTGAAGGTGGTTTTGGACCTGTCTACAAGGGGAAATTGAGTGATGGGAGAGAAGTTGCAGTGAAGAAGTTATCACAGACATCAAATCAAGGGAAGAAGGAGTTTATGAATGAGGCGAAATTGTTGGCTCGTGTGCAGCATAAGAATGTGGTGAATTTGTTGGGTTATTGTGTTCATGGCACAGAGAAGATACTTGTTTATGAGTATGTTCCTCATGAGAGCCTTGACAAGCTTCTATTCAAATCTGATAAGAGAGAGCAGCTTGATTGGAAACGTAGGTTTGGGATAATCACAGGCGTGGCAAAGGGGTTACTTTATCTACACGAAGACTCGCACAATTGTATAATTCATCGGGACATCAAGGCCAGTAACATATTGCTTGATGACAAATGGACGGCCAAAATCGCAGATTTCGGAATGGCACGTCTCTTCCCCGAAGATCAAAGCCAAGTCAAAACACGTGTGGCTGGAACCAACGGATATATGGCTCCAGAATATATGATGCATGGAAGACTATCCGTTAAGGCTGACGTGTTTAGCTATGGGGTTTTCGTATTGGAGTTGATCACCGGCCAAAGAAACTCGTCTTTCAATTTAGACGTGGAGGAGCAGAACCTTCTTGATTGGGCATACAAGATGTACAAGAAAGGGAGGAGCTTGGAAATTGTAGATTCTGCATTAGCATCTTCAGTGATAACAGAGCAAGTAGATATGTGCATTAAGCTAGCTTTGCTATGCATTCAAGGAGATCCACAACTACGACCAACAATGAGGCGTGTGGTTGTGAAGCTTTCAAGGAAATCACCACAAAACCACATGGAAGAACCAACAAGACCAGGAACACCAGGTAGCAGATACAGAAGACATCCTAGACACTCTACTTTGTCTTCCACAGCTGGTACTTCTGGTGCCTCTTATTCTCAATCTTCTGATTCAAGCAACAACTGTGTCACTGCTACTACCACCGTCACCGGTAGAAGTTCAGATACTGCTGAATTAGATCCAAGAGGGAAACGTCCAATGCAGGATTAG 1206 0.4279 MDKSHSFLHSLLKHFKCGYNAEGNNEAELQKMASREQKIFSYETLLSATKNFNATHKLGEGGFGPVYKGKLSDGREVAVKKLSQTSNQGKKEFMNEAKLLARVQHKNVVNLLGYCVHGTEKILVYEYVPHESLDKLLFKSDKREQLDWKRRFGIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDDKWTAKIADFGMARLFPEDQSQVKTRVAGTNGYMAPEYMMHGRLSVKADVFSYGVFVLELITGQRNSSFNLDVEEQNLLDWAYKMYKKGRSLEIVDSALASSVITEQVDMCIKLALLCIQGDPQLRPTMRRVVVKLSRKSPQNHMEEPTRPGTPGSRYRRHPRHSTLSSTAGTSGASYSQSSDSSNNCVTATTTVTGRSSDTAELDPRGKRPMQD* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4087 401 Gene3D Phosphorylase Kinase; domain 1 16 127 - -
Mal7g4087 401 SUPERFAMILY Protein kinase-like (PK-like) 37 321 IPR011009 -
Mal7g4087 401 SMART serkin_6 52 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4087 401 MobiDBLite consensus disorder prediction 351 387 - -
Mal7g4087 401 CDD STKc_IRAK 58 324 - -
Mal7g4087 401 Pfam Protein tyrosine and serine/threonine kinase 54 322 IPR001245 GO:0004672|GO:0006468
Mal7g4087 401 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 376 - -
Mal7g4087 401 PANTHER RECEPTOR-LIKE KINASE 3 376 - -
Mal7g4087 401 MobiDBLite consensus disorder prediction 322 401 - -
Mal7g4087 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Mal7g4087 401 Gene3D Transferase(Phosphotransferase) domain 1 128 337 - -
Mal7g4087 401 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4087 Mal-Chr7 107392864 107399950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4087 40 338 Receptor kinase-like Gene Family AT4G11530 52.824 3.62e-109 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal7g4087 PK_Tyr_Ser-Thr 1.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4087 - - gmx:100795769 634.024