Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4068 ATGAGTTCTGATTTGTCGTCAACTGCATCTGATCTCCCTCTCATTGATGATGAACTTGCCAAAATGTTTACATGCTCAATTTGTTTGGAGATATTTTTTGAGCCATGTACCACTCGTTGTGGTCATAGTTTCTGCAAAAAATGTTTGAAATCTTATGTAGACAAGTCACGTCGAAGATGCCTTAAATGCAGTCAATGGATAAGCAAGGGTGAATCTTACGGTTTGGACATTGTCCTTTGGAACACAATAAAATACATGTTTCCTCGTGAAGTTGAAGCAAGAAAAAAACTTGATGCTTTAAATAGATCGAGGGATTTTAGGGCACAACCTCGTGGAGAATTTTCAATTGAATTCCTCGACAAGTGCATTCGCCCTGTGTCAATAGGCTTGTTTGTAATATCCATATCTATGCTGTTAATATACAAACTGGAGAGGAGGTGGCTGTTAAGCTGTTTCATATATGCACACAATGTGTTTGATAAAATGCTGCAGTGA 495 0.3798 MSSDLSSTASDLPLIDDELAKMFTCSICLEIFFEPCTTRCGHSFCKKCLKSYVDKSRRRCLKCSQWISKGESYGLDIVLWNTIKYMFPREVEARKKLDALNRSRDFRAQPRGEFSIEFLDKCIRPVSIGLFVISISMLLIYKLERRWLLSCFIYAHNVFDKMLQ* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4068 164 Pfam Zinc finger, C3HC4 type (RING finger) 25 63 IPR018957 GO:0046872
Mal7g4068 164 SMART ring_2 25 63 IPR001841 -
Mal7g4068 164 PANTHER UNCHARACTERIZED 14 106 - -
Mal7g4068 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
Mal7g4068 164 ProSiteProfiles Zinc finger RING-type profile. 25 64 IPR001841 -
Mal7g4068 164 PANTHER - 14 106 - -
Mal7g4068 164 SUPERFAMILY RING/U-box 17 85 - -
Mal7g4068 164 ProSitePatterns Zinc finger RING-type signature. 40 49 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4068 Mal-Chr7 107145460 107163089 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4068 15 69 C2H2 Transcription Factor Family AT5G39550 36.207 2.90e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4068 - - mtr:MTR_1g093975 121.709