Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4065 ATGGGTCGAGTCCGAACCAAAACCGTGAAGAAATCCTCCTGTCAAGTGATCGGACTTCATTGCCCTAAATTGGGAACTGAATTCCACCACAACAAGAAGGTTCTCGAAGAAGTCGCACATATCTCAACAAAGCGTCTTCGTAACAAGATCGCTGGTTGCACCACTCATCTCATGAACCGAATCCAAAAAGGACCTGTTCGTGGAATCTCCTTGAAGCTACAAGAGGAGGAGCGTGAGCGTCGTATGGATTTTGTTCCTGATGTTTCTGCCATTAGGGTTGATCATATTGAGGTTGATAAGGAAACCCTAGAAATGCTTGCTGCTCTTGGTATGGCTCAGATTCCTGGTGTTGTTCAGGTTTGA 363 0.4573 MGRVRTKTVKKSSCQVIGLHCPKLGTEFHHNKKVLEEVAHISTKRLRNKIAGCTTHLMNRIQKGPVRGISLKLQEEERERRMDFVPDVSAIRVDHIEVDKETLEMLAALGMAQIPGVVQV* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4065 120 Pfam Ribosomal S17 1 118 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mal7g4065 120 PANTHER 40S RIBOSOMAL PROTEIN S17 1 120 - -
Mal7g4065 120 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mal7g4065 120 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mal7g4065 120 PANTHER 40S RIBOSOMAL PROTEIN S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mal7g4065 120 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4065 Mal-Chr7 107099121 107099483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4065 1 120 Cytoplasmic Ribosomal Protein Gene Family AT3G10610 74.167 2.03e-61 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4065 K02962 - gmx:100785402 184.496