Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4018 ATGGTTGCCCAACAGCCACAACTTCAGATTCAAACTCAGCAACCCACACCTTCTCCTCAAGATGAAGCCTTGAAGAGGAACACCGATTGTGTCTACTTTCTTGCTTCTCCTTTGACATGCAAAAAGGGAAACGAATGTGAGTACCGCCATAGTGAGTATGCTCGAGTCAATCCTAGAGATTGCTGGTATTGGTTGAATGGCAACTGCTTGAATTCCAAGTGTTCATTCCGTCATCCGCCTCTTGACGGGTTGTTAGGAACACCACCAGCAACTGCTGCTGCTGGACCATCTGTACCCGCACCACAGATTGCAGCAACATCTGCAACCCATGCACCTTATAATGCTAGCAAACAAGCTGTGCCTTGCATTTTCTTTCAAAAGGGGTATTGCTTAAAAGGTGACAGATGTGCCTTCCTCCATGGACCAAATCCTACCAATGGCAGTAAAATAGCTACACAGGGGTCAATGACAATGACCAACCAAGGAACAGAGATTCCAAGTTTTAAGAAACCTTTTGGCGGCATTGAAAAACAAACACAAGAAAGGAAAACTTCCCAAGCAAATGTTGCAGCTGTTGAAGCTAAACCTGTCCAAAAATTTGAGACTGCTCCACAGAAAAATATGTTTAAATTGGAGAAGCATGTGCCACCGCCACCTGCAGGGTTTGATAACGAGGTGTCGAGATTTAAGACAACTAGTTCTCCACCGCCAACAAATGGGCCTAATGCCCGGTCTAATCGTGTGCATCAACCTCGTTTGCCAGATGATCACAGTTTCCATAGTGGTAAGGACAGTGACGAGTTTCTCAGAGAGTCGTCTCCTGGGTTTGATGTTCTTGTAGCTGACGAACTTAGAAATTCTGATTACTATCACGGGGAAGATGAATTTGGTAAAACAAGAGGTCAAGATGAAAGAGGCCTAGACTCTTTGAATGAATACGATGTAGGGCATTCTACTGATTATAGTTTAGCTGCTGATATCGATCGAGATAGATTTCGTGTTCCCCAAGGTTATGACTCATATGATCACATGCAAGAGCCATATGGCTGGGAACCTAGAAAGGGATCAGCCCATATAGAAAGAAGGGCTCATCACAGATCTCGTAGTCCTGACAGTGTTGAGGTCTCAGATCTTCGACACCGTTTATCCAAGCGCAGGAAGGGAAATGGTCTAAAATCTGTCGTCACTCATGACGAGGAGCTAAGTCATCGATTTTCTCGGAAGGATTCACACCAGTTACCTTCAAATGAGAGATCTGTCAATAATCGTTTCCGAGGCAGAATAAATCTTCCACCAAACGGTGGTGACGGTCACCTAGAGAGGGACTTAGACAGAGGAAGAATCAGTGGCCGGTTGTCATCTGGAAGGCTGCATTCACCTCACGAGGGAAGGATCCAGGATAGATTAAGAGGAAGGTTGCCAGATGATGAGAGGAGAAACTTCAGCAGTCGATCGAATGGGGACCACTTCTCTGCACCAAAAAGTCTTGCTGAACTTAAGTATGGGAGGAACACTGAGAATAATGAGCAACAATCATTTGGAAAGAGGAAAAGCTTCAGGGATCACCAACAATATGATGATGATGTACCATTTGAAGGTCCAAAACCACTTAGTGAAATTCTGAAGGAGAAGAAAGGAGTTGGAGCTGGTGAAGCATCCTCCCACAGTAGCAAATATGCCGACAATAAGAATGAAGGAAATACCGAAAATGGAACATTGTCAGAGAGCAAGGAAGAACCCAAGATTCAGGCTGCTGATGGAGTTGACAATACTGATGTAACTCACGGTCAATCATCCGAGGAAGGAATGATATACGACGAAGCTGCCGAAGATCAAGAGTATGAAGGTGAAGGAGACTATGAGTATGAGCAAGGTGATGAGGAGTATGAATATGAACAAGTTGAGGGTGAAAATCAAGAGCAAGAATATATGGAAGATGAAGATGGGGATGACTTTGCCAAGAAGATTGGTGTTGTTCTTTCATAA 1986 0.4431 MVAQQPQLQIQTQQPTPSPQDEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCWYWLNGNCLNSKCSFRHPPLDGLLGTPPATAAAGPSVPAPQIAATSATHAPYNASKQAVPCIFFQKGYCLKGDRCAFLHGPNPTNGSKIATQGSMTMTNQGTEIPSFKKPFGGIEKQTQERKTSQANVAAVEAKPVQKFETAPQKNMFKLEKHVPPPPAGFDNEVSRFKTTSSPPPTNGPNARSNRVHQPRLPDDHSFHSGKDSDEFLRESSPGFDVLVADELRNSDYYHGEDEFGKTRGQDERGLDSLNEYDVGHSTDYSLAADIDRDRFRVPQGYDSYDHMQEPYGWEPRKGSAHIERRAHHRSRSPDSVEVSDLRHRLSKRRKGNGLKSVVTHDEELSHRFSRKDSHQLPSNERSVNNRFRGRINLPPNGGDGHLERDLDRGRISGRLSSGRLHSPHEGRIQDRLRGRLPDDERRNFSSRSNGDHFSAPKSLAELKYGRNTENNEQQSFGKRKSFRDHQQYDDDVPFEGPKPLSEILKEKKGVGAGEASSHSSKYADNKNEGNTENGTLSESKEEPKIQAADGVDNTDVTHGQSSEEGMIYDEAAEDQEYEGEGDYEYEQGDEEYEYEQVEGENQEQEYMEDEDGDDFAKKIGVVLS* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4018 661 MobiDBLite consensus disorder prediction 249 270 - -
Mal7g4018 661 MobiDBLite consensus disorder prediction 290 309 - -
Mal7g4018 661 SUPERFAMILY CCCH zinc finger 117 141 IPR036855 GO:0046872
Mal7g4018 661 ProSiteProfiles Zinc finger C3H1-type profile. 55 81 IPR000571 GO:0046872
Mal7g4018 661 MobiDBLite consensus disorder prediction 555 571 - -
Mal7g4018 661 MobiDBLite consensus disorder prediction 337 624 - -
Mal7g4018 661 Coils Coil 175 195 - -
Mal7g4018 661 PANTHER ZINC FINGER CCCH-TYPE-CONTAINING 11A 11 661 - -
Mal7g4018 661 ProSiteProfiles Zinc finger C3H1-type profile. 116 143 IPR000571 GO:0046872
Mal7g4018 661 MobiDBLite consensus disorder prediction 391 414 - -
Mal7g4018 661 MobiDBLite consensus disorder prediction 513 549 - -
Mal7g4018 661 Pfam Zinc-finger containing family 25 79 IPR041686 -
Mal7g4018 661 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 120 142 IPR000571 GO:0046872
Mal7g4018 661 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 11 661 - -
Mal7g4018 661 MobiDBLite consensus disorder prediction 346 381 - -
Mal7g4018 661 MobiDBLite consensus disorder prediction 604 624 - -
Mal7g4018 661 MobiDBLite consensus disorder prediction 226 246 - -
Mal7g4018 661 MobiDBLite consensus disorder prediction 1 22 - -
Mal7g4018 661 SMART c3hfinal6 116 142 IPR000571 GO:0046872
Mal7g4018 661 SMART c3hfinal6 25 52 IPR000571 GO:0046872
Mal7g4018 661 SMART c3hfinal6 57 80 IPR000571 GO:0046872
Mal7g4018 661 MobiDBLite consensus disorder prediction 437 484 - -
Mal7g4018 661 ProSiteProfiles Zinc finger C3H1-type profile. 24 53 IPR000571 GO:0046872
Mal7g4018 661 MobiDBLite consensus disorder prediction 203 270 - -
Mal7g4018 661 Gene3D - 16 81 - -
Mal7g4018 661 Gene3D - 107 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4018 Mal-Chr7 106530952 106533951 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal7g4018 zf-CCCH_3 7.3e-12 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4018 - - gmx:102669253 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4018 7 106530952 106533951 Mal7g4018 7 106530952 106533951 ECH