Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4005 ATGAAGATTTCAACACTTCTTGTAATAGTTGTTATCCTCTTTGTGTGTTTTATTTCTATGCCACTACTAGTTCTTGGCCAAGAGAATTTAGATAAAGAAACAACTTTGAGTGTGCTTTTGGAAGTGAAGAAATCTTTTGTCCAAGACCCAATGAATGTTTTGAGTGATTGGTCACAAAACAACACAGATTACTGTAGCTGGAAAGGTGTTTCATGTGGTTTGAGCTCTTTGCTTGATGACTCAGTGCATGTGGTTGGACTCAACCTTTCTGACTCGTCACTCACCGGGTCAATTTCACCTTCACTCGGTCGTGTGAAAAACTTGCTCCACCTTGATCTTTCCTCCAATAGTCTCACAGGTCCCATTCCAACAAATCTCTCAAACCTTGTTTCATTGGAAACTTTGCTTCTGTTTTCTAACCAACTCAGTGGTTCTGTTCCCACTGAGTTTGGCTCGCTCACTAGTCTCCGAGTCATGCGACTCGGAGACAATGCATTAACAGGTCAACTCAGTCTCTTGGAGAATCTTGTTCTGCAAGACAACGAGCTGATGGGTCCAATTCCGTCCGAGTTAGGGAACTGCTCAAGCCTCACAGTCTTCACTGCTTCTAACAACAAGCTCAATGACTCAATTCCTAGTGAACTGGCTCACCTCAAGAATTTACAGCTTCTCAACCTTGGTAACAATAGTTTAACAGGGGAGATTCCGAGTCAACTCGGCGATATGAGTGAACTTGTTTACCTCAATTTCATGGGGAACCAGCTTGAAGGTGCAATTCCACCGTCTCTAGCTCAGCTGGGTAATCTTCAAAATCTTGACTTGTCTATGAACAAGCTCATTGGAGGAATTCCAGAGGAGTTTGGCAACATGAGTCAGCTTGGTTTCATGGTTCTGTCTGGAAACAACCTTAATAGTCTCATACCAAAAACAATATGTTCCAATACAACAAATTTGGAACATTTGATGCTATCAGAAAGTGGTCTTTTTGGTGAGATTCCAGCTGAATTGAGTCGGTGTCAGTCACTGAAACAACTTGATTTGTCTAACAATTCACTCAATGGGTCCATACCTCTTGAGATTTATGAGTTGGTGGAGTTAACTGATCTCTTGCTAAACAACAATAGTTTGGTTGGTTCAATCTCTCCTTTTATAGGGAACTTAAGCAACTTGGAGACCCTTGCTTTGTATCACAACAATTTGAAGGGTGATCTTCCCAGAGAGATTGGAATGCTTGGGAAGTTGGAAATTTTATATCTTTATGATAATCGGTTATCAGGGGATATACCTATGGAGATTGGTAATTGTTCAAGCTTGCAAATGATTGATTTCTTTGGAAACAGTTTCAAGGGAGAAATTCCTATCACTATTGGAAGGCTGAAAGAGTTGAATTTCCTTCACCTTAGGCAGAATGAGCTTGTGGGTGAGATTCCTGCCACCTTGGGTAACTGTGGTAAACTGAATATCCTGGATTTGGCTGACAATCGGCTCACGGGTGCAATTCCTGCAACATTCGGATTCCTCGAGTCATTGCAGCAGCTCATGCTCTACAACAATTCTCTTGAAGGTAACCTTCCTCACCAATTGATAAATGTAGCAAACTTGACCAGGGTGAATCTTTCAAAGAATAGATTGAATGGTAGTCTAGCTGCTTTGTGTAGCTCTAAATCGTTTCTTACTTTCGATGTTACTGAGAACGAGTTTGACGGTGAAATTCCGCCTCAACTGGGAAACTCACCCTCCCTTTATAGGCTAAAATTAGGCAACAACAAATTTTCAGGTGAAATTCCAAGAACATTGGGAAAAATCCATGATCTGTCATTGTTAGTTCTATCAGGAAATTCACTCACCGGACCAATACCAGACGAGCTTTCTTTGTGCAATAAACTGGCTTACATTGATTTAAACAGTAATCTTCTTTATGGACAAATACCATCATGGCTTGAAAAATTGCCTCAGTTGGGAGAGCTTAAGCTCTCCTCCAACAATTTTTCTGGACCTCTTCCATTAGGCCTATTCAAATGTTCCAATTTACTAGTTCTCTCTCTAAATGGTAACTCACTCAATGGAAGTCTCCCGGCTGATATTGGTGATCTTACATATCTTAATGTCCTCCGACTCGACCGTAATGAGTTCTCTGGACCAATCCCACAAGAGATAGGTAAGTTGAGCAAGCTTTATGAGCTTCAGCTCTCCAGGAATAGCTTTAATGGTGACATGCCAAGTGAAATTGGAAAACTTCAAAACCTACAAATCACTTTAGACCTCAGTTACAATAATCTCTCAGGTGGCATACCACCTTCTCTAGGGACTGTGTCAAAATTAGAAACACTTGATCTTTCCCACAATCAACTTACTGGAAAAATCCCTCCACAAGTTGGTGAAATGAGCAGCTTGGAAAAGCTTGATCTCTCTTACAACAAGCTTCAAGGGAAATTGGACAAGAAGTTCTCCCGGTGGCCAGATGAGGCATTTGAAGGAAACCTAAACCTTTGTGGAAGCCCTCTTGACCGCTGCGACAGTGATGGTACTGAGCCGTCACGCCTAAGTGAGTCATCTGTAGTGATAATATCTGTCATTTCAACTTCAGCTGCAATTGCACTATTGATACTTTCAATAAGAATCTTCTGCAAAAACAAGCAAGATTTTTTAAGGGAAGACAGCAAAGTGACTTCTTATGTCTACTCTTCCTCTTCATCACAAGCACAGAGACGACCGCTGTTCCAGCTAAGAGCTGCTGGAAAAAGGGATTTCAATTGGGAAGATATCATGGATGCAACCAACAATCTAGACGATGACTTCATGATTGGTTCGGGTGGTTCAGGGAAAGTCTACAAAGCTGAATTGTCCAGTGGAGAGACAGTTGCTGTCAAGAAGATTTCATCAAAAGATAATTTTCTGTTAAACAAAAGTTTCTTAAGAGAAGTTAATACACTTGGGAGAATAAAGCATAGACATTTGGTGAAGCTAATAGGATTCTGTAGCAATAGAAACAAAGGAGCAAGTTGGAATCTATTGATCTATGAGTACATGGAGAATGGAAGTTTATGGGATTGGCTTCACAGGAAACCAAGCATCGCGAGCAAAGTAAAGAAGAGCCTTGATTGGGAGACAAGATTCAAAATTGCTGTGGGATTAGCTCAAGGAGTGGAGTACCTACATCACGATTGTGCACCAAAGATCATTCACAGAGACATCAAATCCAGCAACATATTGCTAGATTCCAAAATGGAGGCACACTTGGGAGATTTCGGACTGGCAAAAGCACTCATTGAAAGTTATGACTCAAATACTGAATCAAATTCTTGTTTTGCTGGGTCTTATGGCTACATGGCTCCAGAGCATGCGTTCTCCTTGCAGTCAACAGAAAAAAGTGATGTTTTCAGCATGGGAATAGTTCTTATGGAACTTGTTAGTGGTAAAATGCCAACAAGTGACTTTTTTGGAGCTGATATGGACATGGTGAGATGGATGGAGATGCATATTAATATGCATGGCTCTACCCGTGAGAAGTTGATAGATCCTGAACTGAAACCTCTTTTACCTGGTGAAGAGTTTGCAGCATTCCAAGTGCTTGAGATAGCCTTGCAGTGCACGAAAGCTACACCACAGGAGAGACCATCTTCAAGGAAAATATGTGATCTTCTCCTCCATGTATTCAATAACAGAAGGATGGACTTTGAGAAGATGAAATTGGACCACAAGTAA 3705 0.4108 MKISTLLVIVVILFVCFISMPLLVLGQENLDKETTLSVLLEVKKSFVQDPMNVLSDWSQNNTDYCSWKGVSCGLSSLLDDSVHVVGLNLSDSSLTGSISPSLGRVKNLLHLDLSSNSLTGPIPTNLSNLVSLETLLLFSNQLSGSVPTEFGSLTSLRVMRLGDNALTGQLSLLENLVLQDNELMGPIPSELGNCSSLTVFTASNNKLNDSIPSELAHLKNLQLLNLGNNSLTGEIPSQLGDMSELVYLNFMGNQLEGAIPPSLAQLGNLQNLDLSMNKLIGGIPEEFGNMSQLGFMVLSGNNLNSLIPKTICSNTTNLEHLMLSESGLFGEIPAELSRCQSLKQLDLSNNSLNGSIPLEIYELVELTDLLLNNNSLVGSISPFIGNLSNLETLALYHNNLKGDLPREIGMLGKLEILYLYDNRLSGDIPMEIGNCSSLQMIDFFGNSFKGEIPITIGRLKELNFLHLRQNELVGEIPATLGNCGKLNILDLADNRLTGAIPATFGFLESLQQLMLYNNSLEGNLPHQLINVANLTRVNLSKNRLNGSLAALCSSKSFLTFDVTENEFDGEIPPQLGNSPSLYRLKLGNNKFSGEIPRTLGKIHDLSLLVLSGNSLTGPIPDELSLCNKLAYIDLNSNLLYGQIPSWLEKLPQLGELKLSSNNFSGPLPLGLFKCSNLLVLSLNGNSLNGSLPADIGDLTYLNVLRLDRNEFSGPIPQEIGKLSKLYELQLSRNSFNGDMPSEIGKLQNLQITLDLSYNNLSGGIPPSLGTVSKLETLDLSHNQLTGKIPPQVGEMSSLEKLDLSYNKLQGKLDKKFSRWPDEAFEGNLNLCGSPLDRCDSDGTEPSRLSESSVVIISVISTSAAIALLILSIRIFCKNKQDFLREDSKVTSYVYSSSSSQAQRRPLFQLRAAGKRDFNWEDIMDATNNLDDDFMIGSGGSGKVYKAELSSGETVAVKKISSKDNFLLNKSFLREVNTLGRIKHRHLVKLIGFCSNRNKGASWNLLIYEYMENGSLWDWLHRKPSIASKVKKSLDWETRFKIAVGLAQGVEYLHHDCAPKIIHRDIKSSNILLDSKMEAHLGDFGLAKALIESYDSNTESNSCFAGSYGYMAPEHAFSLQSTEKSDVFSMGIVLMELVSGKMPTSDFFGADMDMVRWMEMHINMHGSTREKLIDPELKPLLPGEEFAAFQVLEIALQCTKATPQERPSSRKICDLLLHVFNNRRMDFEKMKLDHK* 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4005 1234 Gene3D Ribonuclease Inhibitor 503 842 IPR032675 -
Mal7g4005 1234 SUPERFAMILY L domain-like 312 638 - -
Mal7g4005 1234 Gene3D Transferase(Phosphotransferase) domain 1 1010 1233 - -
Mal7g4005 1234 Pfam Leucine rich repeat 485 544 IPR001611 GO:0005515
Mal7g4005 1234 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 8 170 - -
Mal7g4005 1234 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 168 1232 - -
Mal7g4005 1234 SUPERFAMILY L domain-like 37 308 - -
Mal7g4005 1234 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 168 1232 - -
Mal7g4005 1234 Gene3D Ribonuclease Inhibitor 32 171 IPR032675 -
Mal7g4005 1234 Gene3D Ribonuclease Inhibitor 246 501 IPR032675 -
Mal7g4005 1234 PRINTS Leucine-rich repeat signature 774 787 - -
Mal7g4005 1234 PRINTS Leucine-rich repeat signature 795 808 - -
Mal7g4005 1234 Pfam Leucine Rich repeats (2 copies) 773 811 IPR025875 -
Mal7g4005 1234 Gene3D Ribonuclease Inhibitor 172 245 IPR032675 -
Mal7g4005 1234 ProSiteProfiles Protein kinase domain profile. 929 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4005 1234 SUPERFAMILY L domain-like 561 820 - -
Mal7g4005 1234 Gene3D Phosphorylase Kinase; domain 1 888 1009 - -
Mal7g4005 1234 SMART serkin_6 929 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4005 1234 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 8 170 - -
Mal7g4005 1234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1060 1072 IPR008271 GO:0004672|GO:0006468
Mal7g4005 1234 Pfam Leucine rich repeat N-terminal domain 37 72 IPR013210 -
Mal7g4005 1234 Pfam Protein kinase domain 934 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4005 1234 SUPERFAMILY Protein kinase-like (PK-like) 913 1215 IPR011009 -
Mal7g4005 1234 ProSitePatterns Protein kinases ATP-binding region signature. 935 958 IPR017441 GO:0005524
Mal7g4005 1234 SMART LRR_typ_2 387 410 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 650 674 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 795 826 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 507 531 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 722 746 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 153 180 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 771 793 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 218 242 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 411 435 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 266 289 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 290 314 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 459 483 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 339 363 IPR003591 -
Mal7g4005 1234 SMART LRR_typ_2 129 152 IPR003591 -
Mal7g4005 1234 ProSiteProfiles Leucine-rich repeat profile. 773 795 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4005 Mal-Chr7 106326874 106330773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4005 627 818 Receptor kinase-like Gene Family AT1G17750 30.418 3.25e-23 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal7g4005 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4005 - - gmx:100801889 1933.69