Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3999 ATGGTGGCGTCGCTTGTGGGATTGGGAAGAGGAGTTGGTAGTGGAGCACATTCTCTAGATCAATGGCTGTGGCAGCCGGATCCTGATGGTGGTTACTCTGTTCGTGGAGCATACCAATTGCTTACTGTGACTGATAATAACAATATTGGAGAGGAGATTGCTTTGGTGTGGCATAAACAGGTTCCCACTAAAGTGTCAATTTTTGCGTGGCGTCTTTTGCGGGATAGGTTGCCAACCAAAGATAACTTGGTGTCTCGAGGCATTTTATCTGAAGAGCAGCGAATGTGTTCAAATGGATGCGGTGAATTGGAATCAGCTAGTCATTTGTTTTTATATTGTCATCACTTTGCGGCACTTTGGCCTCTTCTTCGAATGTATGCACAATGTCCACATCTTCAAGAGGTTCAACGGGCCCGAATAGGCGATGAAATGAGGCTTGATTCGAACCAAGTCAAGATTTGGTTTCAATATAGGAACCAATTCAAGGGACAGAACACACATGAAGCAACAGAACAAGCTATACAAAATGTGCAGCATGAGACATTGTTCAATGTTAATCAAAATAACAAGAGGAAAAATCCAACAATTCCTACACTTGAATCTTCATCACTTGATCTCTCACAAGGAAGTTTGAGAAACAGAAACCAAGAAATCATTGTTCCTGTTCAACAACAATTTTCTGTTTTTCCACACCTTGCTGAAACTTATCATCACAATTTTAATCTTGTTGCTGATCAACAACATATTGCTGCTGATCCTGCTATAGCTGCAACATTTTCAGCAGTTAATCTTGATCAAAACCAAAATAGTTCAGCTATTACTCATGCACCTCAACAAAATGTATCAGTTCTTACTTCTGCTGCTATAGCACCTGAACAAAATCTTGGAAACATTTGGGATGAAGAAATTTCGGATTGGTTGTTACCTATTGATGAAGATAGTCTAGAGAAAAAAATGTCTGATTTATCTGATGCTCTTCATGATGTTACTCCTGTTCATAGTTCTGTTCCTGATCCTGCTCCTGCTCCTGCTTCTGATAATCACATGGCTACTATTGATGAAAATGTTGTTGCTGCTGATAAAGATATTGGTGATGCTAATGGAGTTTCGGATGGTTGTGTGCCTCATCCAATAAGCGAATATAAGGAAAGGGAGAAGAAAATGATCATGGAGACTGCTAATAATGCGATGGAAGAGTTAACAAGGCTTCTTAAATTAAATGAGCCGTTCTGGTTTAGGTCTATGAAGGATGGGAGGTTTATTCTTCAACGCGAGACTTATGATAAGATGTATCGTAAGAGTAGCGTCTTAAACGGACCACTTGCGCGTATAGAGTCATCAAAAGATGAATTGATAGTGAGCATGTCTGGTGCACAATTGGTTGACATGTTTCTAAATTCGGAAAAATGGACTGCACTTTTTCCAACTATGGTTAAAAGTGCAAAAACAATAGAAGTACTTGAAGATGGATCGTTAGAAAGCCGCGATGGAGCTCTGCAACGGATGTATGCAAAAATGCACATTCTTTCACCCTTAGTTCCAACTCGAAACACCTTGTTTCTTCGTTATTGTAAACAAATCGAAAAAGGTGTATGGGTGATAGCAGATGTGTCATTGTCACTTGATGCCATAGAACTTGCATCCAGTCCTCCTAATGCTTGGAAGTTTCCATCTGGTTGCATGATTCAAGAACATACTGATGATTTATGCAGGGTATCTTGGGTGGAACACATACAAGTGGATGATAAGTTACAAACCAACGATTTCTTCAAAAAAACAATTTGTAGCAATAATGGATATAGAGCTCAAAGATGGCTTTGGACACTTGAAAGAATGTGTCAGAGAATTTCGACTTCTTCAATTCAAGATATACCTACTAGCACCGAAACTAGAAGAGAGGTGATCAATCCGATGGAAGGAAAAAAGATTGTGATGAAGCTTGGTGAGCGAATGTTAAAAATATTTTATGAAGCGCTGGACATGTCATCAAATAGAGACTTTCCGGAACTGAATACCATGGATAATGATATGGTAAGGGTAAATGTTCGGAAATGCAAAGATCCAGGCACTGAAAATGGTGTGATCCTCACTGCTTCTTGCTCCTTTTGGCTTTGTTGCTCTCCCGAGTTTGCTTTCGATTTTTTGAAAGACAATAAAAGAAGATTTCAGTGGGATGTTCTCTGTGCAGGTCATCCAGTGGAAGAAATTCATCGCATCACATATGGAACAAATCCTGGAAACTTTACTTCCATTATTAAGACATTAAACCCTAAAGATAATGATGATCTGAGGATTCTCCAAGAATGCTATACACATTGTATGGAATCAGGGTTGGTATATTGTCCAATTGATACAGAAACAATAAATTGTGCAATACGTGGAGAAGATTGTTCACTGCTGCCACTTCTTCCATCTGGTTTTACTATATCAGGAGATGGTCGACCTTCAAATGACAATAAGGGAAAAATAGCTGGTGACTCGTATGAAGGTTCGGTTGTATCGGTGGCATATCAAATGCTGATTGGCAAGCCTTCACATATGGATAATCCAAACTTGGATGATGTGAAGAAAATGAATAAGTTTGTTACAACAGCAGTGAACAATATTAGAGTTGCACTTGACTGCCTTGACTATTAG 2637 0.3921 MVASLVGLGRGVGSGAHSLDQWLWQPDPDGGYSVRGAYQLLTVTDNNNIGEEIALVWHKQVPTKVSIFAWRLLRDRLPTKDNLVSRGILSEEQRMCSNGCGELESASHLFLYCHHFAALWPLLRMYAQCPHLQEVQRARIGDEMRLDSNQVKIWFQYRNQFKGQNTHEATEQAIQNVQHETLFNVNQNNKRKNPTIPTLESSSLDLSQGSLRNRNQEIIVPVQQQFSVFPHLAETYHHNFNLVADQQHIAADPAIAATFSAVNLDQNQNSSAITHAPQQNVSVLTSAAIAPEQNLGNIWDEEISDWLLPIDEDSLEKKMSDLSDALHDVTPVHSSVPDPAPAPASDNHMATIDENVVAADKDIGDANGVSDGCVPHPISEYKEREKKMIMETANNAMEELTRLLKLNEPFWFRSMKDGRFILQRETYDKMYRKSSVLNGPLARIESSKDELIVSMSGAQLVDMFLNSEKWTALFPTMVKSAKTIEVLEDGSLESRDGALQRMYAKMHILSPLVPTRNTLFLRYCKQIEKGVWVIADVSLSLDAIELASSPPNAWKFPSGCMIQEHTDDLCRVSWVEHIQVDDKLQTNDFFKKTICSNNGYRAQRWLWTLERMCQRISTSSIQDIPTSTETRREVINPMEGKKIVMKLGERMLKIFYEALDMSSNRDFPELNTMDNDMVRVNVRKCKDPGTENGVILTASCSFWLCCSPEFAFDFLKDNKRRFQWDVLCAGHPVEEIHRITYGTNPGNFTSIIKTLNPKDNDDLRILQECYTHCMESGLVYCPIDTETINCAIRGEDCSLLPLLPSGFTISGDGRPSNDNKGKIAGDSYEGSVVSVAYQMLIGKPSHMDNPNLDDVKKMNKFVTTAVNNIRVALDCLDY* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3999 878 Pfam START domain 393 614 IPR002913 GO:0008289
Mal7g3999 878 SMART START_1 391 615 IPR002913 GO:0008289
Mal7g3999 878 SUPERFAMILY Bet v1-like 670 815 - -
Mal7g3999 878 SUPERFAMILY Homeodomain-like 116 159 IPR009057 -
Mal7g3999 878 CDD START_ArGLABRA2_like 386 614 - -
Mal7g3999 878 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 123 874 - -
Mal7g3999 878 CDD homeodomain 122 156 IPR001356 GO:0003677
Mal7g3999 878 ProSiteProfiles START domain profile. 382 618 IPR002913 GO:0008289
Mal7g3999 878 Pfam zinc-binding in reverse transcriptase 32 120 IPR026960 -
Mal7g3999 878 Pfam Homeodomain 122 158 IPR001356 GO:0003677
Mal7g3999 878 Gene3D - 117 161 - -
Mal7g3999 878 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 123 874 IPR042160 -
Mal7g3999 878 Gene3D - 390 598 IPR023393 -
Mal7g3999 878 SUPERFAMILY Bet v1-like 385 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3999 Mal-Chr7 106256871 106267537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3999 385 875 Homeobox Transcription Factor Family AT5G17320 37.702 4.40e-100 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal7g3999 START 2.1e-28 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3999 K09338 - qsu:111982963 442.58