Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3998 ATGAGTTCAGGTTCAGGAGACAAGCAAAACATGCATGAACAAAATGGTTGCTTTGATCCCAACACAATGGATGAAGGTGTTGAAAACTCTCCCAATGATAACATCAACATAAGCCTTGAAGAGAATTTCAAGCCTTCTGTGGAGGAACTATCTTATAACAATCATCAAAATCCACAACACCTTGAAGATGTTTCCACTTATACAAATGGATTCACTCCCTCATCAGTAGACAATTCACAACAACAAAATCTTGGTTTGAACATTGGGAATTCCTATAATAACATGGATAACCATTTGGTACAAGAGGTGTATCAGAACTCAAGTTGGGACCCTAGTGTTCAGGATATGGATTATGTCAATCACCAAGAACACCACCAACTATCTGAACAACAATATCAACAATTTGTTGAGGCGCAAAACCATAACCAAAGCTACAATCCCTCGACCATTCTAGACCCTCATTACCCTTCACCAGATGTCCTTAACCTTCTCAACTTACCTAGATGCTCAGCTTCATTGCTCACAAACCCATCCACCATTTGCATGACAAACCCAACTCAAAATCCACCCAATTTTCCTAACTCGATGAATTTTCTTGGAGACCTTCCAATAGGATCATCAGACAACACAAGCGGATCATCGGTTTTGTATGATCCTCTATATCCTTTGAACCTTCCTCCACAGCCTCCAGCTCTTAGGGAACTGTTTCAATCTCTGCCTCGAGGCTATAGCATGCCAACCAACTCAAGAAATGGTTCTCTTTTCGGTGGAGGGGATGAGATGGAGGGAGATGGAGACATGGGAGTGCTGGAATTCAACAGGGTTACTGCTGTTGGCAAAGGAAGAGGAGGAAAAGCTACCAAACATTTTGCAACTGAGAAACAAAGAAGAGAGCAATTAAATGGAAAGTACAAAATCTTGAGGGATCTCCTCCCAAATCCCACCAAGGTTGATAGAGCATCAGTGGTTCAAGATGCTATTGAGTATTTAAGAGAGCTGATTAGAACAGTGAATGAGCTGAAATTATTGGTGGAGAAGAAAAGACATGGGAGGGAGATGTGCAAGCGACTTAAAACTGAAGATGATGCTGCAGAAAGCTGTAACATAAAGCCTTTTGGTGATCCAGATGGAAATATAAGAACCTCATGGTTGCAAAGGAAATCAAAAGACAGTGAGGTTGATGTCCGGATTATCGATGATGATGTTACGATCAAACTATGTCAGAGAAAGAAGGTTAATTGCTTGCTGTTCGTGTCCAAGGTTTTGGATGAACTTCAGTTGGAACTTCAACATGTTGCAGGTGGACATGTTGGTGAATACTGCAGTTTCTTGTTCAATAGCAAGGTAACTGAAGGTTCATCAGTGTATGCAAGTGCTATAGCCAACAGGGTGATTGATGTTCTGGACACACAATATGCAGCAGGTGTTCCACATACAAGTAGGCTGTAG 1449 0.4141 MSSGSGDKQNMHEQNGCFDPNTMDEGVENSPNDNINISLEENFKPSVEELSYNNHQNPQHLEDVSTYTNGFTPSSVDNSQQQNLGLNIGNSYNNMDNHLVQEVYQNSSWDPSVQDMDYVNHQEHHQLSEQQYQQFVEAQNHNQSYNPSTILDPHYPSPDVLNLLNLPRCSASLLTNPSTICMTNPTQNPPNFPNSMNFLGDLPIGSSDNTSGSSVLYDPLYPLNLPPQPPALRELFQSLPRGYSMPTNSRNGSLFGGGDEMEGDGDMGVLEFNRVTAVGKGRGGKATKHFATEKQRREQLNGKYKILRDLLPNPTKVDRASVVQDAIEYLRELIRTVNELKLLVEKKRHGREMCKRLKTEDDAAESCNIKPFGDPDGNIRTSWLQRKSKDSEVDVRIIDDDVTIKLCQRKKVNCLLFVSKVLDELQLELQHVAGGHVGEYCSFLFNSKVTEGSSVYASAIANRVIDVLDTQYAAGVPHTSRL* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3998 482 Pfam Helix-loop-helix DNA-binding domain 287 333 IPR011598 GO:0046983
Mal7g3998 482 SMART finulus 290 339 IPR011598 GO:0046983
Mal7g3998 482 PANTHER TRANSCRIPTION FACTOR BHLH91 11 476 - -
Mal7g3998 482 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 282 353 IPR036638 GO:0046983
Mal7g3998 482 MobiDBLite consensus disorder prediction 1 32 - -
Mal7g3998 482 MobiDBLite consensus disorder prediction 1 17 - -
Mal7g3998 482 Gene3D - 282 360 IPR036638 GO:0046983
Mal7g3998 482 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 284 333 IPR011598 GO:0046983
Mal7g3998 482 CDD bHLH_AtMYC1_like 289 353 IPR045896 -
Mal7g3998 482 PANTHER TRANSCRIPTION FACTOR BHLH91 11 476 IPR045895 GO:0006355|GO:0048658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3998 Mal-Chr7 106243559 106245383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3998 11 479 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 35.686 7.45e-89 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g3998 HLH 4.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3998 - - gmx:100782512 671.389