Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3984 ATGGCTCAAAATCATTCTCATTCTCAATCTCCTATACCTTGTGATGATCACAACCACCATGATCATGAACAAGTAGCTGGTTTTGATTGGATGGTTCTTGTAGCAGCTATTCTATGTGCCATTGTTTGTGCTCTTGGTCTTAACACAATGTTACAATGTGCTTTTCAATGTCTTGGTCGTGTAGTTACTGAGCCTATGCAATGGATTGCTTCTAGAAGGTTGAATTCCGGAATCAAAAAGAAAGAAATGGTAGCTTTACCAACTTCAACATATAGTACTCATGACTCAGGTTCTCCATCTTCAGCTTCTAGTTGTGTCATTTGCTTAACTGAATTCTGTAATGGGGATCAAATAAGGTTCCTACCAAAATGCAATCATCATTTCCATGTGGTTTGTATTGACAAGTGGTTGTTGTCTCATTCTTCCTGTCCTACTTGCAGGCATCTTACTCAAGTCTAG 459 0.3878 MAQNHSHSQSPIPCDDHNHHDHEQVAGFDWMVLVAAILCAIVCALGLNTMLQCAFQCLGRVVTEPMQWIASRRLNSGIKKKEMVALPTSTYSTHDSGSPSSASSCVICLTEFCNGDQIRFLPKCNHHFHVVCIDKWLLSHSSCPTCRHLTQV* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3984 152 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 10 149 - -
Mal7g3984 152 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 151 IPR013083 -
Mal7g3984 152 Pfam Ring finger domain 104 147 IPR001841 -
Mal7g3984 152 SUPERFAMILY RING/U-box 104 149 - -
Mal7g3984 152 SMART ring_2 105 146 IPR001841 -
Mal7g3984 152 PANTHER OS06G0666500 PROTEIN 10 149 - -
Mal7g3984 152 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3984 Mal-Chr7 106047317 106047775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3984 25 149 C3H Transcription Factor Family AT2G17450 43.077 6.69e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3984 - K19040 cam:101507208 276.944