Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3959 ATGGCCGCCGACGGTGAACCAATGCCTACTCGCTGGTCTTTCGAGGAGTTCAAAAGGTATTATGATATTAGGCTTGGTAGGAAGAAAGTGGTGGAGAATGGTGATTGTGCGGTCAGTAATGGAAATTCGTCCGGCATTGCATCTAATGGCAATTCACACCGCAAAACTACGTCGGATAGAGCTATCTATGAGCAGTTCCAAAGCCAGGGGCAGAATTCGAATCATACAAATGGTTTTGCACCAAACGGTGTTGATGATAAGCCGCAGAAGTCTTTGCTTCCACCTTTTGAATCTGCAGAAATGCGTACTTTAGCAGAGAGCTTAAGTAGGGATATCATTCGCGGGAGTCCAAATGTGAAGTGGGAAAGCATCAAGGGGTTAGAGAATGCCAAACGTTTACTGAAAGAAGCTGTAGTGATGCCGATTAAGTATCCCAAGTACTTTACTGGTCTGTTATCACCATGGAAGGGCATTCTCCTTTTTGGGCCCCCAGGGACAGGAAAGACAATGCTTGCAAAGGCAGTTGCAACAGAGTGCAACACTACATTTTTTAATATTTCAGCATCGTCTGTTGTCAGCAAATGGCGAGGTGATTCGGAGAAGTTAATAAAGGTGTTATTTGAGCTTGCAAGGCATCACGCGCCCGCAACAATATTTCTTGACGAAATTGATGCAATCATTAGTCAACGTGGTGAGGGACGCAGTGAACACGAAGCAAGTAGACGGTTAAAAACTGAACTACTCATTCAGATGGATGGTTTAGCACGGACGGATGAGCTTGTTTTTGTTTTGGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCCATGCTTAGACGTCTTGAGAAGCGAATCCTTGTACCGCTTCCAGAACCAGAAGCAAGAAGAGCAATGTTTGAGGAACTCCTTCCTCTGCAACCTGATGAGGAACCGATGCCCTATGATTTACTGGTGGACCGGACAGAAGGATATTCAGGCTCGGATATCCGCCTACTTTGTAAAGAAACGGCAATGCAGCCATTGAGACGATTAATGTCACAACTTGAACAGGAACCAGATGTGGTGCCTGAAGAAGAGTTGCCAAAAGTTGGGCCTGTCGTGCCTGAAGATGTAGAGGCAGCTTTAAAGAACACACGGCCATCTGCTCATCTCCTTGCCCACAAATACGACACGTTTAATGCCGATTATGGTAGTCAGTTACTTCAATGA 1209 0.4574 MAADGEPMPTRWSFEEFKRYYDIRLGRKKVVENGDCAVSNGNSSGIASNGNSHRKTTSDRAIYEQFQSQGQNSNHTNGFAPNGVDDKPQKSLLPPFESAEMRTLAESLSRDIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIKVLFELARHHAPATIFLDEIDAIISQRGEGRSEHEASRRLKTELLIQMDGLARTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPLQPDEEPMPYDLLVDRTEGYSGSDIRLLCKETAMQPLRRLMSQLEQEPDVVPEEELPKVGPVVPEDVEAALKNTRPSAHLLAHKYDTFNADYGSQLLQ* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3959 402 MobiDBLite consensus disorder prediction 69 93 - -
Mal7g3959 402 CDD AAA 125 289 - -
Mal7g3959 402 Pfam AAA+ lid domain 316 351 IPR041569 -
Mal7g3959 402 MobiDBLite consensus disorder prediction 39 58 - -
Mal7g3959 402 Gene3D - 290 378 - -
Mal7g3959 402 PANTHER AAA DOMAIN-CONTAINING 11 400 - -
Mal7g3959 402 SMART AAA_5 154 291 IPR003593 -
Mal7g3959 402 Gene3D - 117 383 IPR027417 -
Mal7g3959 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 381 IPR027417 -
Mal7g3959 402 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 11 400 - -
Mal7g3959 402 Pfam ATPase family associated with various cellular activities (AAA) 158 288 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3959 Mal-Chr7 105641368 105648841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3959 152 361 Calmodulin-binding Proteins AT3G56690 36.620 8.79e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3959 K07767 - gmx:100794098 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3959 7 105641368 105648841 Mal7g3959 7 105641368 105648841 ECH