Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3935 ATGTTATCTCAAAACCTTAAGTTGACTATAGTCATACTCATTTCAATTCTATCCATTATTGTTTCACATGCTGAAACAACAATTTCTGAAGTTGAAATTGAAGCATTGAAAGCATTCAAAAAATCCATAACACATGATCCAAACAAAGCTCTTGCAAATTGGGTTGACACACACCCTCATTGCAACTGGTCAGGCATTGCATGTAACAATTCTTCAAAACATGTCATATCAATTTCACTCTTTGAACTTCAACTCCAAGGTGAGATTTCACCTTTCCTTGGAAACATTTCAACACTTCAACTTATTGATTTAACTTCAAATTCATTCACTGGTCAAATTCCACCTCAAATTAGTCTTTGTACTCAACTTACAACACTTTACCTTACTGGTAATTCTCTCTCAGGTTCAATTCCTCATGAATTAGGTAACCTTAAAATGTTGCAGTATTTGGATATAGGTAATAACTATTTCAATGGAACCTTACCTGATAGCATATTCAATATCACTTCTTTGTTAGGTATTGCTTTCAATTTCAATAACCTTACTGGCACAATTCCTTCAAACATAGGGAATTTAGTTAACACTATACAGATTGGAGGATTTGGTAATAGTTTTGTTGGATCTATACCTGTTTCTATAGGCCAATTAGGATCTTTGATATCTCTTGATTTTAGTCAAAATCACTTATCAGGTGTTATACCTAGAGAGATTGGAAACTTAACAAATTTAGAATATCTTCTATTGCTTGAAAATTCATTGAGTGGAAAAATCCCTTCTGAGTTGGCTCATTGTAGCAATCTTGTTAACCTTGAGTTATATGAAAATAATTTCATTGGTAGTATTCCTCATGAGCTAGGAAATTTAGTTCAATTGGAAACTTTGAGGTTATATGGTAATAACTTGAATTCAACAATACCAGATTCTATATTTAAGTTGAAATCGTTAACACGATTAGGATTATCAGAGAATAACTTAGAGGGGACAATTTCTTCTGAGATTGGAACTTTGAGTTCCTTGAAAGTGTTAACCTTGCATTTAAATAAGTTTACCGGGACAATTCCTTCATCGATAACAAACTTGAGAAACTTGACATCTCTTTCCATGAGTCAGAATCTCCTTTCTGGTGAAATTCCTTCAAACCTAGGTGTGCTTCAAAATTTGAAGTTTCTTGTCTTGAATGACAACTTTTTACATGGACCTGTTCCTCCTAGCATTACCAATTGTACTAGTTTGGTTAATGTGAGTTTATCTATTAATTCTTTAACTGGGAAAATTCCTGAGGGTTTTTCAAGGTTGCCTAATCTTACTTTCCTGTCTCTTACATCCAACAAAATGAGTGGTGAAATACCAGATGATCTTTTCAATTGCTCAAACCTTAGTACTCTAAGTTTGGCGGATAACAACTTCAGTGGATCGATAAAATCCGGTATCAAGAATCTGTTTAATCTCATGCGTTTGCTGCTGAATGAAAATGCTTTCATAGGACCAATTCCACCAGAGATTGGAAACTTGAATAAGCTCATCACTTTGTCCCTTTCTGAAAATATATTTTCAGGTCATATTCCAATAGAATTGTCCAAACTTTCTATCCTTCAAGGACTCTCTCTTCATCACAATGTATTAGAAGGTACAATACCTGATAAACTTTCGGAACTAAGAGGATTGACGATACTTTTGCTGCATGAAAACAAGTTGGTTGGTCAAATACCGGATTCTATCTCAAAGCTTGAGATGCTTTCATACTTAGATCTTCATGGAAACAAACTTAATGGTTCCATTCCAAAAAGCATGGGGAAGCTTGATCATCTTTTGATGTTGGATCTCTCTCACAACAAACTCACGGGATCGATTCCAGGAGACGTCATTGCACACTTCAAAGATATGCAGATGTATCTTAACCTTTCTTACAACCACTTTGTTGGAAGTGTTCCATCTGAGCTAGGGATGTTGGAAATGGCACAAGCCATTGATGTTTCAAACAATAATCTTTCAGGCTTCCTTCCGAAGACACTTGCCGGGTGCAGAAATATGTTCAGTCTTGATTTCTCAGGAAACAACATTTCAGGTCCTATTCCTGCTGAAGTTTTTAGTGGCATGGACTTGCTTCAAAGCTTAAATCTTTCAAGAAATCATTTAGAAGGTCATGTACCTTTGACTGGAATATTTTCACATATCAATGAATCTAGTATGATGGGAAACCAGGCTCTATGTGGAGCAAAATTCCTTAGTCCATGCAGAGAGAATGATCATTCTCTATCAAAGAAGAGCATAGTCATCATTGCCGCACTTGGATCTCTTGCTGTACTTCTACTTGTAGTGCTTCTGATTTTATATTTCAACCGAGGTAGCATTTTCGGTAATTCTACAAAGAGTTTTCATACTGAGAATCATGAACCAGCGAACGGTTCAGCATTGGCTCTTAAAAGATTCAGTGCAAAGGAGTTAGAAAATGCAACCGGTTGTTTCAGCTCAGACTACATCATTGGTGCTAGCAGTTTGAGCACCGTATACAAGGGTCGATTTGAAGATGGTCAGATTGTAGCCATAAAAAAGTTGAATTTGCACCAATTCTCAGCAAATACCGACAAGATATTCAAGAGAGAAGCCAGCACCCTGTGCCAGCTGAGACATAGGAATTTGGTTAAGATACATGGATATGCTTGGGAAAGTCAGAAAACAAAGGCTTTAGTTCTAGAGTACATGGAGAATGGGAATTTGGATAGCATCATACATGACAGAGAAGTTGATCAGTCGAGGTGGACATTATCTGAAAGACTCCGAGTTTTCATTTCTATTGCTAGTGGATTGGATTACTTGCACTCTGGTTATGATTTTCCCATTGTCCACTGTGACCTAAAGCCTTCTAACATCCTTTTAGATAGAGATTTTGAAGCTCATGTCAGTGATTTCGGGACAGCTCGAATACTTGGTCTTCATCTGCAGGACGGTAGTGCCCTTTCCTCAACAGCAGCTTTGCAAGGCACAGTTGGTTATTTGGCACCAGAATTCGCATACATGAGGAAAGTAACGACGAAAGTGGATGTGTTCAGCTTTGGTATCATAGTAATGGAATTTCTAACAAAAAGAAGGCCAACAGGGATCTCAGAATCAATCAGTTTACGTGATGTAGTGGCAAAAGCCGTTGCAAATGGAAAGGAACAGGTTGTCAACATTGTGGACCCTGAATTGATCACAAAAGACCATGGAGAAGTGTTGGAAGAGCTCTTTAAGCTATCATTGTACTGCACCCTCTCTGATCCTGAACATAGACCTAATATGAATGAAGTTTTATCCGCACTGGTGAAGCTTAAGACAGCAAGATAG 3324 0.3718 MLSQNLKLTIVILISILSIIVSHAETTISEVEIEALKAFKKSITHDPNKALANWVDTHPHCNWSGIACNNSSKHVISISLFELQLQGEISPFLGNISTLQLIDLTSNSFTGQIPPQISLCTQLTTLYLTGNSLSGSIPHELGNLKMLQYLDIGNNYFNGTLPDSIFNITSLLGIAFNFNNLTGTIPSNIGNLVNTIQIGGFGNSFVGSIPVSIGQLGSLISLDFSQNHLSGVIPREIGNLTNLEYLLLLENSLSGKIPSELAHCSNLVNLELYENNFIGSIPHELGNLVQLETLRLYGNNLNSTIPDSIFKLKSLTRLGLSENNLEGTISSEIGTLSSLKVLTLHLNKFTGTIPSSITNLRNLTSLSMSQNLLSGEIPSNLGVLQNLKFLVLNDNFLHGPVPPSITNCTSLVNVSLSINSLTGKIPEGFSRLPNLTFLSLTSNKMSGEIPDDLFNCSNLSTLSLADNNFSGSIKSGIKNLFNLMRLLLNENAFIGPIPPEIGNLNKLITLSLSENIFSGHIPIELSKLSILQGLSLHHNVLEGTIPDKLSELRGLTILLLHENKLVGQIPDSISKLEMLSYLDLHGNKLNGSIPKSMGKLDHLLMLDLSHNKLTGSIPGDVIAHFKDMQMYLNLSYNHFVGSVPSELGMLEMAQAIDVSNNNLSGFLPKTLAGCRNMFSLDFSGNNISGPIPAEVFSGMDLLQSLNLSRNHLEGHVPLTGIFSHINESSMMGNQALCGAKFLSPCRENDHSLSKKSIVIIAALGSLAVLLLVVLLILYFNRGSIFGNSTKSFHTENHEPANGSALALKRFSAKELENATGCFSSDYIIGASSLSTVYKGRFEDGQIVAIKKLNLHQFSANTDKIFKREASTLCQLRHRNLVKIHGYAWESQKTKALVLEYMENGNLDSIIHDREVDQSRWTLSERLRVFISIASGLDYLHSGYDFPIVHCDLKPSNILLDRDFEAHVSDFGTARILGLHLQDGSALSSTAALQGTVGYLAPEFAYMRKVTTKVDVFSFGIIVMEFLTKRRPTGISESISLRDVVAKAVANGKEQVVNIVDPELITKDHGEVLEELFKLSLYCTLSDPEHRPNMNEVLSALVKLKTAR* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3935 1107 CDD STKc_IRAK 828 1103 - -
Mal7g3935 1107 Gene3D Phosphorylase Kinase; domain 1 784 900 - -
Mal7g3935 1107 ProSitePatterns Serine/Threonine protein kinases active-site signature. 947 959 IPR008271 GO:0004672|GO:0006468
Mal7g3935 1107 Gene3D Ribonuclease Inhibitor 330 423 IPR032675 -
Mal7g3935 1107 Gene3D Ribonuclease Inhibitor 424 524 IPR032675 -
Mal7g3935 1107 SUPERFAMILY L domain-like 75 194 - -
Mal7g3935 1107 Gene3D Ribonuclease Inhibitor 527 753 IPR032675 -
Mal7g3935 1107 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 366 717 - -
Mal7g3935 1107 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 121 165 - -
Mal7g3935 1107 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 117 - -
Mal7g3935 1107 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 707 1103 - -
Mal7g3935 1107 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 165 297 - -
Mal7g3935 1107 Pfam Protein kinase domain 826 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g3935 1107 Gene3D Ribonuclease Inhibitor 194 329 IPR032675 -
Mal7g3935 1107 Pfam Leucine rich repeat 655 712 IPR001611 GO:0005515
Mal7g3935 1107 Pfam Leucine rich repeat 98 156 IPR001611 GO:0005515
Mal7g3935 1107 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 293 379 - -
Mal7g3935 1107 SUPERFAMILY RNI-like 161 491 - -
Mal7g3935 1107 SMART serkin_6 822 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g3935 1107 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 366 717 - -
Mal7g3935 1107 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Mal7g3935 1107 ProSiteProfiles Protein kinase domain profile. 822 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g3935 1107 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Mal7g3935 1107 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 1 117 - -
Mal7g3935 1107 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 707 1103 - -
Mal7g3935 1107 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 165 297 - -
Mal7g3935 1107 SUPERFAMILY L domain-like 449 745 - -
Mal7g3935 1107 SMART LRR_typ_2 144 168 IPR003591 -
Mal7g3935 1107 SMART LRR_typ_2 600 624 IPR003591 -
Mal7g3935 1107 SMART LRR_typ_2 336 359 IPR003591 -
Mal7g3935 1107 SMART LRR_typ_2 699 724 IPR003591 -
Mal7g3935 1107 SMART LRR_typ_2 432 456 IPR003591 -
Mal7g3935 1107 SMART LRR_typ_2 552 576 IPR003591 -
Mal7g3935 1107 SMART LRR_typ_2 288 312 IPR003591 -
Mal7g3935 1107 SMART LRR_typ_2 360 384 IPR003591 -
Mal7g3935 1107 SMART LRR_typ_2 216 240 IPR003591 -
Mal7g3935 1107 Gene3D Transferase(Phosphotransferase) domain 1 901 1107 - -
Mal7g3935 1107 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 121 165 - -
Mal7g3935 1107 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 293 379 - -
Mal7g3935 1107 SUPERFAMILY Protein kinase-like (PK-like) 805 1100 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3935 Mal-Chr7 105345132 105348708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3935 30 1104 Receptor kinase-like Gene Family AT5G46330 52.201 0.0 1080
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal7g3935 Pkinase 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3935 K13420 - gmx:100817960 1605.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3935 7 105345132 105348708 Mal7g3935 7 105345132 105348708 ECH