LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g3915	ATGAAAAATATTTATAAAAAAAAAAAAATCTTACATACTTTCACTTTATCATCTTTTTCACATTATTATATTTTTCTTCATCTCTGCTGTATCTCCAGCTGCAGATCCTGTACATGGAATCTTATCGTACTTTCTTTATTCCTTAAACTTCAACTTTGCACATTTGCAACCTTTGTGTTGCAGAACAAGAACATGGCTTCAACAGTTTCAGGTTTGTTAACAAACATGCTAGACAAACTACTAACAACAGCTTTCCACAACATTTCAATGGCAAAGGGTCTCCGAAATGACATAACCAATCTCCAAAACACTCTCACCATCATCAATGCCTTCATTCTTGATGCTGAAAACAAACAAACTCAAAGCAACTCCATTTCAGTATGGCTTCAACAACTCAAAGAAGCTTTGTTTGATGCAAGGGACATTCTTGATGAGATTGAATGTGAATCTTTGAGGAACCATGTTGTTAAAACAAATGGAAACTTCACTACTAAGGTACAACGTTTTCTCTCTTCTTCTAGTAACCCTCTTACATTTCGTGTTAAAATGGCACATAAGATCAAAGATATAAGTGATAGGATAGATGAGATTGCTTCTCTTAGGATGAAATTGGGTCTAATAGTATTAGAGAATCATGCAAGTGGAAGTGGAAGTGGTGGAAGTAATAGTACTAGGTTTTTGAGAGAGACTCATTCTTATGTTAGATCTTCTCATGTGATTGGTAGAGATGAAGAGAAAGAAAAGATTATTAAGTTTTTGATGGATCCATCATTAAATAATGATAATGATGAGATTGATGTTATTCCAATTGTTGGAATTGGAGGGTTGGGAAAGACAACACTTGCTCAATTAGTTTACAATGATGATAGGGTGATTGAGTTTTTCAATTTGCGTATGTGGGTCTTTGTTTCTGATGATTTTGATGTTAAGAGATTAGTGTTAGAGATTCTTAAAGCTATGCATGGAATGGAAATAGATGCTCACAAGTATAGTTTTGATCAATTGCAAAATCTGCTTCGCGAAAGGTTATCGGGGAAGAAATTTTTGCTTGTTCTAGATGATGTTTGGAATGAAGATTATAGAGAATGGCTTGAATTGAAAAAGCTTTTACTAGGGATGCATGATGGTGATGACGAGAAGCTTGGTAACAAAATTATCACAACCACTCGTAGTGACAGGGTTGCTTCGATAATGGGGAATGCTTATAAGCACAGCTTGAAGTATCTCCCAGAAGAAGATTGTTTACGGCTTTTTGTTAAGTGTGCATTTCCAGCAGGAGAGGGGAAACATAATCCAAGGCTTGTGGAAATTGGGAAGGACATTGCTAGAAAGTGTAAAGGGTTGCCCCTAGCAGTGGTAAGTTTAGGGTGCATGCTTCGTTCAAGACCTAATGAAAGTGAGTGGAAGAAAGTAAGAGATAGTGAAATTTGGAAAGTGAACCCTCAAGATGATGACGGCATTTTGGCTGCGTTGAAACTAAGCTATAATCACTTGTCATCTGGATTGAAATTGTGTTTCTCTTATTGTTCAATTTTTCCCAAGGGTTATGAGTATACTAATTTGGAGCTGATTTCATTTTGGATGGCCCATGGATTACTGCAAACCAAAAATGAAGACGAGGAACCAGAAGATCTTGGGGAATTTTATATTCAGGAGCTAGTTTCACGGTCTTTCTTTGAATGTGCTTCTGAAGAACAACTTGTTATCGACGGTCTTATTTCTGAAGAACTTGAACTTCTAGGCATCTCTTTTTTCAAAATGCATGATCTTGTTCACGACCTTGCCGTGTTCACAATGCAAAGTGAAAGGGCAGTAGTAAAATTTAATTCAACAAATGTTAAAGAAAAAGTGCAGCATTTATCATTTTCAGACAGTGGTGGAGGGGTTCCTACCTTTGCTAGAATGTCGAGTAAGATCCGAACCATTGGATTCTGGCATGTGAGTCAAAAGCAACTTGCAATCACCGAACCGTTTGTCAAATGGATCTCCAACAAGTTCAAGTACCTTAGGGTGTTGAATATTCAAGGTTCTAATTTTCGGTTCTTGCCGGATTGTTTCAACAAAATGAAGCATTTGAGGTATCTTGATCTAAGTTATTGCCAGAGGTTGGAAAGACTCCCAGATTCCATTTGCACGCTTCAAAGCCTAGAGGTATTAAATCTCTGTAGATGTGTAGCACTTGCATATATTCCCAAAAACTTGATGAACCTTGTCAGCCTTAGGATTTTGTGGATCACCACAAAAATCACTGATTTGTCTTTCATAGGTATTGAAAACTTGAAATATCTACAAATTTTAATTTTGTGGAATTGTGATAATTTGGTCTTCCTTCCACGTGATTTGAGGTACTTGACTTCTTTGAAGAGACTGACTATTGAGGCTTGCGAAGGGGTGATTAATTTTGAGGATGAAGGAGAAGAGGATGAAAACTACTCCTTGAAACTTGAACGATTTTCAATCGACAAATTACCCAATTTGGTAGCATTACCTGGTTGGCTTAGAAGATCTGATAAAACTTTGAGATACATGGGCCTTTCAGAGTGTTCGAGTTTAATGGCATTGCCAGAATGGTTGGTAAATCTAACATCACTTGAGACACTTATAATTGCCGATTGTCCAAACTTGACATTACCCCAGAATATGGATCGTCTTCAAAACCTTCAAATTTTAAAGATATATGGATGTCCTCAGCTAGTTGAGAGGTGCCAAAAAATTACAGGCAGTGACTGGTCCAAAATAGCTCATATCCCAAATGTTGAACTTGGCAGCGTTTAG	2775	0.3701	MKNIYKKKKILHTFTLSSFSHYYIFLHLCCISSCRSCTWNLIVLSLFLKLQLCTFATFVLQNKNMASTVSGLLTNMLDKLLTTAFHNISMAKGLRNDITNLQNTLTIINAFILDAENKQTQSNSISVWLQQLKEALFDARDILDEIECESLRNHVVKTNGNFTTKVQRFLSSSSNPLTFRVKMAHKIKDISDRIDEIASLRMKLGLIVLENHASGSGSGGSNSTRFLRETHSYVRSSHVIGRDEEKEKIIKFLMDPSLNNDNDEIDVIPIVGIGGLGKTTLAQLVYNDDRVIEFFNLRMWVFVSDDFDVKRLVLEILKAMHGMEIDAHKYSFDQLQNLLRERLSGKKFLLVLDDVWNEDYREWLELKKLLLGMHDGDDEKLGNKIITTTRSDRVASIMGNAYKHSLKYLPEEDCLRLFVKCAFPAGEGKHNPRLVEIGKDIARKCKGLPLAVVSLGCMLRSRPNESEWKKVRDSEIWKVNPQDDDGILAALKLSYNHLSSGLKLCFSYCSIFPKGYEYTNLELISFWMAHGLLQTKNEDEEPEDLGEFYIQELVSRSFFECASEEQLVIDGLISEELELLGISFFKMHDLVHDLAVFTMQSERAVVKFNSTNVKEKVQHLSFSDSGGGVPTFARMSSKIRTIGFWHVSQKQLAITEPFVKWISNKFKYLRVLNIQGSNFRFLPDCFNKMKHLRYLDLSYCQRLERLPDSICTLQSLEVLNLCRCVALAYIPKNLMNLVSLRILWITTKITDLSFIGIENLKYLQILILWNCDNLVFLPRDLRYLTSLKRLTIEACEGVINFEDEGEEDENYSLKLERFSIDKLPNLVALPGWLRRSDKTLRYMGLSECSSLMALPEWLVNLTSLETLIIADCPNLTLPQNMDRLQNLQILKIYGCPQLVERCQKITGSDWSKIAHIPNVELGSV*	925

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g3915	924	Gene3D	-	408	499	IPR042197	-
	Mal7g3915	924	CDD	RX-CC_like	67	199	IPR038005	-
	Mal7g3915	924	Pfam	Rx N-terminal domain	73	161	IPR041118	-
	Mal7g3915	924	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	224	509	IPR027417	-
	Mal7g3915	924	Pfam	NB-ARC domain	243	496	IPR002182	GO:0043531
	Mal7g3915	924	Gene3D	-	224	404	IPR027417	-
	Mal7g3915	924	Gene3D	-	73	188	-	-
	Mal7g3915	924	PRINTS	Disease resistance protein signature	342	356	-	-
	Mal7g3915	924	PRINTS	Disease resistance protein signature	445	459	-	-
	Mal7g3915	924	PRINTS	Disease resistance protein signature	687	703	-	-
	Mal7g3915	924	PRINTS	Disease resistance protein signature	267	282	-	-
	Mal7g3915	924	PANTHER	DISEASE RESISTANCE PROTEIN RP	815	899	IPR044974	GO:0006952
	Mal7g3915	924	PANTHER	DISEASE RESISTANCE PROTEIN RP	120	793	IPR044974	GO:0006952
	Mal7g3915	924	PANTHER	DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED	815	899	-	-
	Mal7g3915	924	PANTHER	DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED	120	793	-	-
	Mal7g3915	924	Gene3D	Ribonuclease Inhibitor	637	836	IPR032675	-
	Mal7g3915	924	Gene3D	Ribonuclease Inhibitor	837	909	IPR032675	-
	Mal7g3915	924	Coils	Coil	129	149	-	-
	Mal7g3915	924	SUPERFAMILY	L domain-like	586	918	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g3915	Mal-Chr7	105109347	105113545	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal7g3915	258	898	WRKY Transcription Factor Family	AT5G45050	22.787	4.52e-13	71.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g3915	-		-	cam:101500245	1464.51