Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3898 ATGGTGACATTCTCGGTCGGCGGATGCGACGACGGTGAAGGATCAAGCAACCCAAACCAGAAGCGTCGAAGGGTCGACGCCGGAGAAGAAGTCGCCGCCGCAACTAGAGAAGAAGAAAATCAACAGCCACAAGAAGGGTTTGAAATGGTAAATCCCCCAATTGCAACCCTAGAAAATGATGCAAATGAAGAAAATTCTGGTTCCAGACAACTAAATAATGACATGGGTAAGAATGTTTCTGCTATCATTTCGGATCCTGATGTTCTTGATTGCTTCATTTGCTCTGAACCATTGGCAGTTCCTATTTATCAGTGTGAGAATGGGCATATTGCTTGCTCTAAATGTTGCGGCGAACTTAGGAACAAATGTCCCATGTGCTCAATGCCCATCGGGTACAATCGTTGCCGGGCTGTGGAGAAGTTGCTGGAATCTATTAAAATATCATGCCCAAATGCAAAATATGGCTGCAAAGATATGTTTAGTTGCAGTATGAAAAGTAGCCATGAGAAGGAATGCATATATATACCATGTAAATGCCCACATACAGGCTGCGGTTTTCTTGCCTCATCCAAGGAGTTAGCTCTCCACTTCAGCCATAGACATGCAGGCTTTGGAATACAGTTTACCTATGACAAATTTTTTTCTGTCTCCTTAAATACTCGGCAGAAACAAATCGTTCTTCTAGATCAAAATGACGCAAGACTGTTTATTGTTCACAATAACCTTGTGGATCTCGGAAATATGGTTCATATTAGTTGCCTTGGCCCCAAAGCGATGGACGGGTTTCATTATGATGTTTTGGCCAGATCTCAGAGGAGCACTTTAATACTGCAATCTTTTACCAAGACCATTCAAGATAATAATGGTCCCGCTCTTAGAAACGAGTTCCTTTTGATTCCTTCTGATTCTTTTGGATTTGGACAGCTTAAACTGGATATTCGTATAAAGTCTAACTAA 957 0.419 MVTFSVGGCDDGEGSSNPNQKRRRVDAGEEVAAATREEENQQPQEGFEMVNPPIATLENDANEENSGSRQLNNDMGKNVSAIISDPDVLDCFICSEPLAVPIYQCENGHIACSKCCGELRNKCPMCSMPIGYNRCRAVEKLLESIKISCPNAKYGCKDMFSCSMKSSHEKECIYIPCKCPHTGCGFLASSKELALHFSHRHAGFGIQFTYDKFFSVSLNTRQKQIVLLDQNDARLFIVHNNLVDLGNMVHISCLGPKAMDGFHYDVLARSQRSTLILQSFTKTIQDNNGPALRNEFLLIPSDSFGFGQLKLDIRIKSN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3898 318 Pfam Seven in absentia protein family 134 297 IPR018121 GO:0005737|GO:0006511|GO:0007275
Mal7g3898 318 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 26 316 IPR044286 -
Mal7g3898 318 ProSiteProfiles Zinc finger SIAH-type profile. 144 202 IPR013010 GO:0008270
Mal7g3898 318 Coils Coil 54 74 - -
Mal7g3898 318 MobiDBLite consensus disorder prediction 1 48 - -
Mal7g3898 318 SUPERFAMILY TRAF domain-like 144 315 - -
Mal7g3898 318 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 26 316 - -
Mal7g3898 318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 197 IPR013083 -
Mal7g3898 318 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3898 Mal-Chr7 104897785 104900874 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3898 54 288 C3H Transcription Factor Family AT2G41980 26.423 2.65e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3898 K04506 - gmx:100797881 390.193