Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3893 ATGGCTACCACCATTTCATCAACTTGCTTCCTCTTTGTTCCTTTAATTTTATCATCGTTGTTATGTCCCAAAACAACATTATGTGCAACAGTCCTAGAAGACCTCAAAAACTTACACAAACCACCAGATTTCAACACTACAATTTTCAACAACTGTCTCAAAAACCCATCTCTTAGATACTGCACTTCCTCCCCCATGGTGGACCTTGATGAAATATTCAAACACACTATTGTTGCTAGCCATCTATGCAATGAATCCAACAACCCAAATTGTGTTGAATCATTCCCCAAAATCGATCTTCGAAACCGACCAAACATTGCATCTCTTTACTTGTCTTTCACTTTCTTTTGGAAATATTGTCCTTTAACTATTCAATCCATTGATTTCTCAAACAATTCTGTGAAGGGTAGTTTTCCAAATGATGTTCTTTATTGCACACAAATTCAGTCTCTTGATTTAAGTATCAATGAATTTTCTGGTGAAATTCCAATTCAAAGTTTCTCTTCACTAACTAACCTCACTTTTCTTAACCTCTCTTATAACTGTTTCTCAGAGAGTGATATTTCTGATTCACAATTCTTCAAGAAGTTTAACTCTTCTAGTTTTCTTCATTCTGGTGCTCTCATTGATCATAAAAAGTTTACTATAAAAGCTATCATTTTACTGGTTGGTTTTCCTATTCTTGTCATTTTGATTGTAATTTTCTTGGGATGGCTTTGTTTTCAAAGACCTGATTTTCTACCAAGAATATTTCAAAGAAGTAGTGGATTTACATTTACACCAGCAATTCTAAAGGCTGCAACTTTTGGTTTTTCGAACGAAAATTTAGTTGGTAAGAGTGATATTGTTCATATCTACAAAGGGGTGTTAAGAGATGGAACTGAAGTGAAAATTGAGATGTATTGGGATGACATATCAAGGTATAGTTATCATAAATTTGTTGAGGAATGTAAGATTCTGTCTGAGTTTAACCACAAGAACCTTGTTAAAGTTTTAGGGTGGTGTAAAGGTAGGAAATTCAGGGCTGTTATAACAGAATGGACAAAAGAAGAAAATGTTGAAATGTGGTTAGTAGGGTCAGGTCCATCATGGAATCATAGAGTCAAAGTTTTGATGGGAGTTGTTGAATGCATGGTATATCTGCATGAGGAATGGTCTGAAGTTGATTATGATCTTAAGACAAGTAGTGTTTTGTTATCTGATAATCTTGAACCATTGATTTCAAGGTTTCAAGTTGGAGATAGACACAACAATCGAAAAAAGATATGTAAGTTTGGAGTATTTCTGCTAGAGATGATACTAAGCAAGAGAGTTCAAGAGGAGTTTGATGGAAGTGATGCTGGATTTATTAGCTACATGAAAACCCTTCATCTTGCAGACTTAGAGAAGATGATTGATGAGAGAATGGATGTTACTGAAACAACTTTACATCAAATTAAACAGGCTTTATCCTTGGGATTAATGTGCATAGATCAATCAAACAGTGAGCAACCAAGCTTGGCCCAATTATTTAATATTGTATCAAAGGCCTACAAAGCTAGCCTTGCTTTGACATCTGCAAATCATAAAACATTTCATGGAGATAGAATTAAGGGACACAAGCGTGTTCAGTTCAAATAA 1620 0.3469 MATTISSTCFLFVPLILSSLLCPKTTLCATVLEDLKNLHKPPDFNTTIFNNCLKNPSLRYCTSSPMVDLDEIFKHTIVASHLCNESNNPNCVESFPKIDLRNRPNIASLYLSFTFFWKYCPLTIQSIDFSNNSVKGSFPNDVLYCTQIQSLDLSINEFSGEIPIQSFSSLTNLTFLNLSYNCFSESDISDSQFFKKFNSSSFLHSGALIDHKKFTIKAIILLVGFPILVILIVIFLGWLCFQRPDFLPRIFQRSSGFTFTPAILKAATFGFSNENLVGKSDIVHIYKGVLRDGTEVKIEMYWDDISRYSYHKFVEECKILSEFNHKNLVKVLGWCKGRKFRAVITEWTKEENVEMWLVGSGPSWNHRVKVLMGVVECMVYLHEEWSEVDYDLKTSSVLLSDNLEPLISRFQVGDRHNNRKKICKFGVFLLEMILSKRVQEEFDGSDAGFISYMKTLHLADLEKMIDERMDVTETTLHQIKQALSLGLMCIDQSNSEQPSLAQLFNIVSKAYKASLALTSANHKTFHGDRIKGHKRVQFK* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3893 539 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 538 - -
Mal7g3893 539 SUPERFAMILY L domain-like 76 196 - -
Mal7g3893 539 Pfam Protein tyrosine and serine/threonine kinase 276 426 IPR001245 GO:0004672|GO:0006468
Mal7g3893 539 Gene3D Transferase(Phosphotransferase) domain 1 359 531 - -
Mal7g3893 539 ProSiteProfiles Protein kinase domain profile. 271 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g3893 539 Gene3D Ribonuclease Inhibitor 50 213 IPR032675 -
Mal7g3893 539 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 538 - -
Mal7g3893 539 SUPERFAMILY Protein kinase-like (PK-like) 254 507 IPR011009 -
Mal7g3893 539 Gene3D Phosphorylase Kinase; domain 1 254 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3893 Mal-Chr7 104876749 104878785 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3893 124 526 Receptor kinase-like Gene Family AT5G45780 22.363 2.32e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal7g3893 PK_Tyr_Ser-Thr 4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3893 - - gmx:100779045 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3893 7 104876749 104878785 Mal7g3893 7 104876749 104878785 ECH