Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3881 ATGGTAGAAACGACACCCCTAAAACATGAAGTCAATCTTCACCATTCATCTCCACTGCCAAGCACCGATAATGTGAATATTACATCCATTCCGATGGTTGATGGTGTAGATAAATTAGTGAACAATATTGTGCAACATGGAAAAGAGAGTACTGTTGATTATATATCGCACTTGCAAATGGAGTTTGAGTCTGAGGCTGTGGCATATGAATTTTATAATGAGTATAGTAGGAAATGTGGTTTTGGTATCCGTCGAGAATATGCAAATAAAAGCAAAAAAGATGGAGTTCTTACTTCAAGAAGATTTGTATGCTTCAAAGAGGGTAAACGAGGTGCTGACAAACGAGACTACTTGACAAAAGAGGCTCGAGCAGAAACTAGAACAGGATGTCTAACGCGTATGGTTATTTCACTTGATCGAAAGATTGGAAAATACAAGGTTGTTGATTTTGTAGCAGAACATAGTCACATTCTTCAACCACCTGATCTACATGGGAATAATATCCAAATGTCACAACCAAGCCAAACTAACACAATTGGAATGTACAACTTTTTTTAG 558 0.3728 MVETTPLKHEVNLHHSSPLPSTDNVNITSIPMVDGVDKLVNNIVQHGKESTVDYISHLQMEFESEAVAYEFYNEYSRKCGFGIRREYANKSKKDGVLTSRRFVCFKEGKRGADKRDYLTKEARAETRTGCLTRMVISLDRKIGKYKVVDFVAEHSHILQPPDLHGNNIQMSQPSQTNTIGMYNFF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3881 185 Pfam FAR1 DNA-binding domain 70 159 IPR004330 -
Mal7g3881 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 158 - -
Mal7g3881 185 MobiDBLite consensus disorder prediction 1 20 - -
Mal7g3881 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 26 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3881 Mal-Chr7 104639615 104641787 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal7g3881 FAR1 4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3881 - - mtr:MTR_5g015480 253.447