Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3855 ATGGTAGATAATAATAATAATAATAATAATAATAATAATAATAACAATGTTAATCTTCCACCTGGATTTCGATTTTATCCGACAGATGAAGAGCTTGTGGTCCATTTCCTTCATAGAAAAGCTTCCCTTTTACCTTGTCATCCAGATGTTATCCCTGATCTTGACCTCTATCCATTTGATCCATGGCAACTTCAAGGTAGAGCTTTGGAAGAGGGAAACCAGTGGTACTATTATAGTAGAAGGACACAAAATAGAATGACCAACAATGGTTATTGGATGCCAATGGGATTGGAAGAACAAGTTGTTACAAGCTCAAGCAATAAGAGAGTTGGTATGAAGAAATATTATGTGTTTCATATTGGTGAAGCACCTGATGGTAACCAAACCAATTGGATAATGCAAGAGTATCGTCTTTCAGATTCTGCCTCTTCCTCTAGCAGATCATCATCCAAAAGAAAATCACAACCAAAATCATGGGTGATATGTCGAGTTTATGAGCGTGATGAAGATGACCAAGATGGAGATGGAACAGAGTTGTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGATGAAGTAAGCTTGCCAAATTAG 600 0.3667 MVDNNNNNNNNNNNNNVNLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLDLYPFDPWQLQGRALEEGNQWYYYSRRTQNRMTNNGYWMPMGLEEQVVTSSSNKRVGMKKYYVFHIGEAPDGNQTNWIMQEYRLSDSASSSSRSSSKRKSQPKSWVICRVYERDEDDQDGDGTELSCLDEVFLSLDDLDEVSLPN* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3855 199 Pfam No apical meristem (NAM) protein 20 138 IPR003441 GO:0003677|GO:0006355
Mal7g3855 199 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 16 196 - -
Mal7g3855 199 ProSiteProfiles NAC domain profile. 19 167 IPR003441 GO:0003677|GO:0006355
Mal7g3855 199 SUPERFAMILY NAC domain 14 166 IPR036093 GO:0003677|GO:0006355
Mal7g3855 199 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
Mal7g3855 199 PANTHER NAC TRANSCRIPTION FACTOR 56 16 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3855 Mal-Chr7 104365290 104366250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3855 17 172 NAC Transcription Factor Family AT1G52890 43.293 2.05e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal7g3855 NAM 8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3855 - - gmx:100788893 328.561