Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3842 ATGGACGCTTCATCCTTAACCTCAAGCCTAAGCATTTCAAATTCAAAGCAATTTCATCACCTTCCACAACTCTCAAGTAAACAGCTAAGACCTTGTTACGTGCACTTTGCAACAATTTCATGTAGAGCAACAAAGCTAATGGAAGAAACCAAGAATGGATCAAATTTCTACAAAATGTTGTCGGTGAATCCGAAAAGCGCAACAACGGAAGAGATAAAGAGAGCTTATAGGTCAATGGCACTTCAATATCATCCTGATGTGTGTCATGATCCTTCCATAAAAGAGGAATCAACGAAAATATTTGTTCGGTTAAATGCAGCTTATGAAACTTTGTCAAATCCTATGCTTCGTGAACAATATGATAGTGAATTGGGTTTGAGAAACAATATGATGAATAATAGTATTATTAGTGAAGAAATTTGGAGAAGTAGGTGGCAAGAACAAGTGGTTGAATTGAAGAAAAGGTCTTATAGACGTATGGGACAAAAAGGAAATTCTTGGGGTAGCAGAATGAGGACACAAAGCATGAAAGATCGGAACTAG 543 0.3702 MDASSLTSSLSISNSKQFHHLPQLSSKQLRPCYVHFATISCRATKLMEETKNGSNFYKMLSVNPKSATTEEIKRAYRSMALQYHPDVCHDPSIKEESTKIFVRLNAAYETLSNPMLREQYDSELGLRNNMMNNSIISEEIWRSRWQEQVVELKKRSYRRMGQKGNSWGSRMRTQSMKDRN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3842 180 Pfam DnaJ domain 55 121 IPR001623 -
Mal7g3842 180 ProSiteProfiles dnaJ domain profile. 55 124 IPR001623 -
Mal7g3842 180 MobiDBLite consensus disorder prediction 161 180 - -
Mal7g3842 180 CDD DnaJ 55 113 IPR001623 -
Mal7g3842 180 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 179 - -
Mal7g3842 180 SUPERFAMILY Chaperone J-domain 41 120 IPR036869 -
Mal7g3842 180 SMART dnaj_3 54 116 IPR001623 -
Mal7g3842 180 PRINTS DnaJ domain signature 76 91 IPR001623 -
Mal7g3842 180 PRINTS DnaJ domain signature 153 172 IPR001623 -
Mal7g3842 180 PRINTS DnaJ domain signature 58 76 IPR001623 -
Mal7g3842 180 PRINTS DnaJ domain signature 96 116 IPR001623 -
Mal7g3842 180 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Mal7g3842 180 Gene3D DnaJ domain 42 149 IPR036869 -
Mal7g3842 180 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 3 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3842 Mal-Chr7 104266145 104266687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3842 57 122 C2H2 Transcription Factor Family AT1G74250 41.176 1.42e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3842 - - gmx:100811478 217.238