Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3830 ATGTCTCACTTCGGTAGGTCAGGTCCTCCAGATATCGCCGATACCTACTCTCTCCTCGTTCTCAACATCACCTTCCGTACCACCGCCGATGACCTATTTCCTCTGTTTGATAAGTATGGCAAGGTTGTTGACATCTTCATCCCCAAAGATCGAAGGACTGGTGAATCGAGGGGTTTCGCTTTTGTGCGTTACAAGTATGCTGATGAAGCTTCCAAGGCTGTTGATAGGCTCGACGGAAGAATGGTTGATGGTCGTGAAATAACCGTCCAGTTTGCAAAATATGGCCCTAATGCTGAGAGGATTCAGAAAGGAAGGATTATTGAAACATCCCCGAGATCAAAGAGCTCAAGGAGCCGCAGTCCCAGCAAGAGAAGGCATCGTGATGACTACAAAGAAAAGGATTACAGGAGGAGAAGTCGCAGCAGGAGTTATGATAGGCATGAACGTGACAGGTACCGTGGGAGAGATAGGGACCATCGTCGCCGAAGCAGAAGCCGTAGTGCTAGTCCTGGTTACAAGGGTCGTGGAAGGGGGCGCCATGATGATGAGCGTCGTAGTAGAAGCCGGAGCAGATCAGTGGACAGCCGTTCCCCTGCACGACACAGTCCTAATCCTAAAAGGAGCCCCTCTCCAAGGAGGAGCCCTTCTCCAAAGAGGAGCATTTCCCCTCAAAAGAGTGCTTCCCCCAGGAAAAGTCCACGCCGTGAAAGTCCTGATAATCGTAGCCGTGATGGGAGGTCTCTTACGCCTCGCAGTGTCTCACCACGAGGTCGTCCAGATGCTTCTCGAAGCCCATCTCCTCGAAATTCAAACGGTGATGAATAA 825 0.5103 MSHFGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIQKGRIIETSPRSKSSRSRSPSKRRHRDDYKEKDYRRRSRSRSYDRHERDRYRGRDRDHRRRSRSRSASPGYKGRGRGRHDDERRSRSRSRSVDSRSPARHSPNPKRSPSPRRSPSPKRSISPQKSASPRKSPRRESPDNRSRDGRSLTPRSVSPRGRPDASRSPSPRNSNGDE* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3830 274 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 274 - -
Mal7g3830 274 MobiDBLite consensus disorder prediction 174 196 - -
Mal7g3830 274 MobiDBLite consensus disorder prediction 122 155 - -
Mal7g3830 274 MobiDBLite consensus disorder prediction 214 228 - -
Mal7g3830 274 MobiDBLite consensus disorder prediction 229 246 - -
Mal7g3830 274 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Mal7g3830 274 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 88 IPR000504 GO:0003723
Mal7g3830 274 SMART rrm1_1 17 90 IPR000504 GO:0003723
Mal7g3830 274 SUPERFAMILY RNA-binding domain, RBD 9 102 IPR035979 GO:0003676
Mal7g3830 274 MobiDBLite consensus disorder prediction 100 274 - -
Mal7g3830 274 Gene3D - 5 107 IPR012677 -
Mal7g3830 274 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR SC35 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3830 Mal-Chr7 104158451 104161629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3830 14 92 Eukaryotic Initiation Factors Gene Family AT3G11400 34.177 4.84e-09 54.3