Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3816 ATGTTCTCAATATTTGGTCAGTACAATTCTAAAGGACCTATCAAGTTTAACGCTTCCTTGGTCAAATCTTTTCATGGTATTTGGAAAAATTTGATTCGACCCAAGACTTACAAAAAAATCAGGGCTTGCATGGATAAACCAGATGAAGAAATTAATGAAAGAACAACCTTAGTGGGAATTGTAGGAGAAGAGATTGAAACAGCAGGTGACGACGGCGTACCCTTCTGTGACGGAGCCATGGAAAACGACGACGTTGATATGCTCGGCGCCGATAACAACGAAGCCGATTTGGATGATATGAAGAAACGGTTGAAGGAAATGGAAGATGAAGCTGCTGCTTTAAAGGAGATGCAGGCTAAGGTCGAGAAAGAAATGGGATCTGTTCAAGATCCTGCTAATGCTTCTGCAAGTCAGATTAATAGGGAGGAAGTTGATGCTCGATCAATCTTTGTGGGCAATGTGGACTATGCATGTACTCCCGAAGAAGTGCAGCAGCATTTCCAATCGTGTGGAACTGTAAACCGAGTCACCATTCGTACTGATAAGTTTGGCCAACCCAAGGGTTATGCTTATGTAGAATTTGTTGAAGTAGAAGCTGTTCAAGAGGCTCTTTTGCTGAATGAATCTGAACTACATGGACGTCAATTGAAGGTTACTGCTAAGAGGACCAATGTACCTGGGATGAAACAATTTCGTCCCCGCCGGCCTAGTAATCCATACATGGGGTTTCGAGGCAGAACTCCATATGTACCTCCTTTTGCCTATGCTCCTGCTCCTTATGGTTATGGAAAGGTGCCAAGGTTCAGAATGGGGATGCGCTACAGCCCCTACTATTAA 837 0.4361 MFSIFGQYNSKGPIKFNASLVKSFHGIWKNLIRPKTYKKIRACMDKPDEEINERTTLVGIVGEEIETAGDDGVPFCDGAMENDDVDMLGADNNEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSVQDPANASASQINREEVDARSIFVGNVDYACTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAVQEALLLNESELHGRQLKVTAKRTNVPGMKQFRPRRPSNPYMGFRGRTPYVPPFAYAPAPYGYGKVPRFRMGMRYSPYY* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3816 278 CDD RRM_II_PABPs 148 219 - -
Mal7g3816 278 Gene3D - 84 220 IPR012677 -
Mal7g3816 278 SUPERFAMILY RNA-binding domain, RBD 135 247 IPR035979 GO:0003676
Mal7g3816 278 SMART rrm1_1 148 219 IPR000504 GO:0003723
Mal7g3816 278 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 147 223 IPR000504 GO:0003723
Mal7g3816 278 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 72 275 - -
Mal7g3816 278 PANTHER POLYADENYLATE-BINDING PROTEIN 1-LIKE 72 275 - -
Mal7g3816 278 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 149 217 IPR000504 GO:0003723
Mal7g3816 278 Coils Coil 90 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3816 Mal-Chr7 103971560 103977466 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3816 148 260 Eukaryotic Initiation Factors Gene Family AT2G36660 28.070 9.40e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3816 K14396 - gmx:100784473 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3816 7 103971560 103977466 Mal7g3816 7 103971560 103977466 ECH