Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3798 ATGGGGCTTCATCACAGAAAACTCTTATCTGAATCTGACTGTGATATCTTCTGTCATGATGTGCAGTTATGTACCAAAAACTGTGATGATTGCCTCAAAGACTGCTATAACTACATCTCTCCACCACCACCATCTGATCACACCAAAAACAAAAGTACCACTTACTTGATCATAAGTTTTTCTATTGTAGCTGCTATTTTCCTTGTTCTATGCTGCTATGCCTTCTATGTCAAGTTTTTCTCCCCTAGGAACAGGTCAAGAAGAAGAACCTTGTTAACAAGGCAACAAACAGAACATGGTTTTGTTGTTGATGAAGAACATGAAGATGGTTCTGTTGTGGATCACCCCATATGGTATATTCGAACTCCTGGTCTTCAACAATCAATTATTAATGCAATCACTGTTGTTAAGTATAAGAAAGATGAAGGTTTGATTGATGGGTCAGATTGTTCTGTTTGTTTGAGTGAGTTTGAAGAAGATGAGAATCTTAGACTTTTGCCAAAGTGTAATCATGCTTTTCATTTACCTTGTATTGATACTTGGCTTAGATCACACACTAATTGTCCTATGTGTAGGGCTCCTATTGTTGTTGATCCTTTAAGTTTAAGGGTTCCATCTATGGAGCCTAATGTTTTTGTTTCAAATTCTGTGGAAAATTCTCAAATAGAAGCTTTGGAAAGTAGTAGAAGAAATGGAATGGAAGATAGTGTTGTTGATGAGTTGAGAAATGGAGAAGAGGAAGCAGGGGAAGAGGTTGAGGAAAATGGGAGAAGAGTGTGTGAAAATGAGAGTTCAGCTTTAGAGATGGTAAATATGCAACCAAGAAGATCAGTTTCTCTTGATTCTTCTTCTGCTGCTAAGATCAATCTTGCTCTTTCCAAGTTTCTAGCAGTGGAATCTCAAAGGAATTCTGATAGGGAGCAGGTAGGGGAAGTCAATGAACAAATTGTTTCAAAGAGGGTTGGTGGAAATGGGAGTTTGGTAAATATGCATAGTGCTCCTTGCTCAATGAAGAGGTCAAGATCCTTTAATGGTAAACATCTACTATCCTTGTATAGTAGCAGTCAGAAGAAGAAAAATGCTCCACCAAGAAGCTTTTGA 1101 0.3787 MGLHHRKLLSESDCDIFCHDVQLCTKNCDDCLKDCYNYISPPPPSDHTKNKSTTYLIISFSIVAAIFLVLCCYAFYVKFFSPRNRSRRRTLLTRQQTEHGFVVDEEHEDGSVVDHPIWYIRTPGLQQSIINAITVVKYKKDEGLIDGSDCSVCLSEFEEDENLRLLPKCNHAFHLPCIDTWLRSHTNCPMCRAPIVVDPLSLRVPSMEPNVFVSNSVENSQIEALESSRRNGMEDSVVDELRNGEEEAGEEVEENGRRVCENESSALEMVNMQPRRSVSLDSSSAAKINLALSKFLAVESQRNSDREQVGEVNEQIVSKRVGGNGSLVNMHSAPCSMKRSRSFNGKHLLSLYSSSQKKKNAPPRSF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3798 366 PANTHER RING-H2 FINGER PROTEIN ATL54 11 354 - -
Mal7g3798 366 SUPERFAMILY RING/U-box 140 199 - -
Mal7g3798 366 SMART ring_2 150 191 IPR001841 -
Mal7g3798 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 198 IPR013083 -
Mal7g3798 366 ProSiteProfiles Zinc finger RING-type profile. 150 192 IPR001841 -
Mal7g3798 366 Pfam Ring finger domain 149 192 IPR001841 -
Mal7g3798 366 CDD RING-H2_PA-TM-RING 149 192 - -
Mal7g3798 366 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 354 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3798 Mal-Chr7 103764199 103765299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3798 48 223 C3H Transcription Factor Family AT1G72220 47.486 3.95e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3798 - - mtr:MTR_4g093830 574.704