Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3773 ATGGCAATGCACTATGCCAATGGAGCTTCCGTTTCTGACGAAGGAGAAGAACCTCAACCCATTACCACTGCTGTTCCACTCTCTCGTGCCAGTGAGCTCACCATTTCCTTTGAAGGCGAGGTTTACGTTTTCCCTTCCGTTACGCCACAAAAGGTGCAGGCTGTATTGTTACTCTTAGATGGGCAGGAGACATCCAATAACGTCCCCACCTCTGACTTTTCGGTGCAGCAAAACTCTCGGGACATTTGGGGGATAAATGATCCTTTCCGTAATTCAAAGCTTTCACGGAGATTTGCATCGCTTGTTAGGTTCCGTGAAAAACGAAAAGAGAGATGTTTTGAGAAGAGAATCCGGTACACTTGCCGTAAAGAGGTTGCTGAGAGGATGCAACGGAAGAATGGACAGTTTGCATCATTGAAGGAAGAATGCAGTTCTCCTGCTGAAAACCAGGATTCTAGCAATGGTACTCCTTGCTCAGAATCTACTGAACGTAGATGCCTGCATTGTGGAATTGGTGCGAAGTCTACTCCAGTAATGCGTCGAGGACCAGCTGGTCCAAGAACTCTATGCAATGCTTGCGGGCTCACATGGGCAAATAAGGGAACTCTGAGAGATCTCAGTAAAGCAGGAAGGATTGCTTTTGAACAGAATGAACTGGATACTTCAACTGATATAAAGTCTTCAACAACAGAGCCAGAAAATTTACGTGCTGCACAGGAGGACAAGGAAAACCCCCATGAAACAAATCTTGTGCCAATGGATGCCAGACAGTCACCCGAGATGCTAAATGAGCAGTATATGCTCGAAGCTGCTGTAGCAGTTACTGACAACTTGTCCATCCAAGTGGAGAATAATGCTCTTGTTCTGCACGAGCAGGATAATACTATGGAGGATTTTGGTGATGCTTCTGGGACTGAATTTGAGATTCCTGTAGGTTTTGATGATCAGGTCGATATTGATGATTCCAACATGAGGACTTACTGGCTGTGA 990 0.4566 MAMHYANGASVSDEGEEPQPITTAVPLSRASELTISFEGEVYVFPSVTPQKVQAVLLLLDGQETSNNVPTSDFSVQQNSRDIWGINDPFRNSKLSRRFASLVRFREKRKERCFEKRIRYTCRKEVAERMQRKNGQFASLKEECSSPAENQDSSNGTPCSESTERRCLHCGIGAKSTPVMRRGPAGPRTLCNACGLTWANKGTLRDLSKAGRIAFEQNELDTSTDIKSSTTEPENLRAAQEDKENPHETNLVPMDARQSPEMLNEQYMLEAAVAVTDNLSIQVENNALVLHEQDNTMEDFGDASGTEFEIPVGFDDQVDIDDSNMRTYWL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3773 329 ProSiteProfiles Tify domain profile. 26 61 IPR010399 -
Mal7g3773 329 SMART tify_2 26 61 IPR010399 -
Mal7g3773 329 Pfam tify domain 30 59 IPR010399 -
Mal7g3773 329 Gene3D - 160 211 IPR013088 GO:0006355|GO:0008270
Mal7g3773 329 ProSiteProfiles CCT domain profile. 97 139 IPR010402 GO:0005515
Mal7g3773 329 ProSiteProfiles GATA-type zinc finger domain profile. 160 217 IPR000679 GO:0006355|GO:0043565
Mal7g3773 329 Coils Coil 122 142 - -
Mal7g3773 329 MobiDBLite consensus disorder prediction 143 161 - -
Mal7g3773 329 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 162 214 - -
Mal7g3773 329 MobiDBLite consensus disorder prediction 235 249 - -
Mal7g3773 329 Pfam GATA zinc finger 166 202 IPR000679 GO:0006355|GO:0043565
Mal7g3773 329 MobiDBLite consensus disorder prediction 143 162 - -
Mal7g3773 329 CDD ZnF_GATA 165 208 IPR000679 GO:0006355|GO:0043565
Mal7g3773 329 ProSitePatterns GATA-type zinc finger domain. 166 193 IPR000679 GO:0006355|GO:0043565
Mal7g3773 329 PANTHER GATA TRANSCRIPTION FACTOR 28 22 320 IPR045280 GO:0006355
Mal7g3773 329 MobiDBLite consensus disorder prediction 1 22 - -
Mal7g3773 329 SMART GATA_3 160 213 IPR000679 GO:0006355|GO:0043565
Mal7g3773 329 MobiDBLite consensus disorder prediction 221 250 - -
Mal7g3773 329 PANTHER GATA TRANSCRIPTION FACTOR 28 ISOFORM X1 22 320 - -
Mal7g3773 329 Pfam CCT motif 97 138 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3773 Mal-Chr7 103459517 103464084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3773 29 209 Tify Gene Family AT1G51600 58.511 1.54e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal7g3773 CCT 7.8e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3773 - - mtr:MTR_4g093730 538.11