Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3757 ATGGGAAGAGGAAAGATTGTGATTCGAAGGATTGAGAATTTGACTAGCCGGCAAGTGACTTTCTCAAAGAGAAGAAAAGGGCTTTTGAAGAAAGCTAAAGAACTATCCATTCTTTGTGATGCACAAGTTGGATTGATTTTGTTCTCCTCTACTCACAAGCTTTATGACTATGCAAGTTCCAGTATGGAATCTGTTATCGAGCGTTATAACAAGTTAACAGAGGACCATCATCATGAAATGGATCCTACTTTGGAAGTCAAGTTTTGGCAAAGAGAAGCAGCAAGCTTGAGGCAACAATTGCAGCACTTGAATGATAGCAAAAGGCAATTGATGGGCCAAGAACTATCCCATTTGAATTTTGATGAGCTGCGGCATCTAGAAAGTCAATTGGAGATGAGTTTGAAGAGCATTCGTACTAAAAAGGGCCAATTTTTTAGTGATGAGATCAATGAATTACACAAAAAGGGAAGCCTTAGTCGTCAAGAGAATGAAGAACTTCATAAGAAGATAGACATCATCGGTAAGGAAAATGCAGAGCTAGAAAAGGTTATTGGAGCAAGGCTTAGGGAACATGCAGCATCCAATGCTTCACACAGTACTATCAGCTATGGATATGAGGAGCCATTCAGTCTGCAGCTAAGGCAGCCACAATCCCAACAATGA 663 0.4027 MGRGKIVIRRIENLTSRQVTFSKRRKGLLKKAKELSILCDAQVGLILFSSTHKLYDYASSSMESVIERYNKLTEDHHHEMDPTLEVKFWQREAASLRQQLQHLNDSKRQLMGQELSHLNFDELRHLESQLEMSLKSIRTKKGQFFSDEINELHKKGSLSRQENEELHKKIDIIGKENAELEKVIGARLREHAASNASHSTISYGYEEPFSLQLRQPQSQQ* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3757 220 SUPERFAMILY SRF-like 2 89 IPR036879 GO:0003677|GO:0046983
Mal7g3757 220 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Mal7g3757 220 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mal7g3757 220 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Mal7g3757 220 Coils Coil 163 183 - -
Mal7g3757 220 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Mal7g3757 220 Pfam K-box region 85 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mal7g3757 220 PANTHER MADS-BOX TRANSCRIPTION FACTOR 1 219 - -
Mal7g3757 220 Coils Coil 86 113 - -
Mal7g3757 220 CDD MADS_MEF2_like 2 77 IPR033896 GO:0000977|GO:0045944
Mal7g3757 220 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mal7g3757 220 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mal7g3757 220 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Mal7g3757 220 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mal7g3757 220 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 219 - -
Mal7g3757 220 Gene3D - 14 95 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3757 Mal-Chr7 103240788 103250153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3757 1 217 MADS-box Gene Family AT2G14210 56.818 6.90e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mal7g3757 K-box 1.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3757 K09264 - tcc:18608170 274.248