Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3683 ATGGAACAAGAAAATGATAACAGACTAAGGCTGTCTATTGAAGATTTGGGTTTCAATGCTGAAAATGACAGCAACAAGAGAAACTCGAGCAAGAAGTACTATAATAAAGATGGCTCAAGAGTGTTCATATCAAAGAACCTTGAGCTAGAAAGAAATAGGAGGGTGAAACTTAATACTAGACTTTTGATGCTTCGGTCTTTAGTACCAATGGTCACAAATATGACCAAAGAAAGCATTTTTGATGATGCTATTACTTATATCAAGAAGCTTAAAGATGAAGTTAATTGTTTCACACAAATGTTTCAAGCAATGGAAGCAAAAGAAAAGGCTGAGGCAAGAGCAGAACCAAAAGTAGATGAATTTTCTGCTGAAGAGGTTCAAGTGGAAAAAATTGATGGAAATAAGCTATGGGTCAAGATGATTATTGAGAACAAGAGAGGGAGGTTCAAGAAATTAATGGAGACTATGAATGATTTAGGACTTGAAATGATAGATGCCAATGTTACAACCATAAATGGAGCATATCTAATTACAACTTGCATTCAGGGTATGGGTGATCAACCACTTGATGTTCATCAAGCCAAACATTGGCTACCAGATATAATCAAAACCACATGA 618 0.3544 MEQENDNRLRLSIEDLGFNAENDSNKRNSSKKYYNKDGSRVFISKNLELERNRRVKLNTRLLMLRSLVPMVTNMTKESIFDDAITYIKKLKDEVNCFTQMFQAMEAKEKAEARAEPKVDEFSAEEVQVEKIDGNKLWVKMIIENKRGRFKKLMETMNDLGLEMIDANVTTINGAYLITTCIQGMGDQPLDVHQAKHWLPDIIKTT* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3683 205 Coils Coil 87 107 - -
Mal7g3683 205 Gene3D - 42 108 IPR036638 GO:0046983
Mal7g3683 205 Pfam Helix-loop-helix DNA-binding domain 48 90 IPR011598 GO:0046983
Mal7g3683 205 PANTHER TRANSCRIPTION FACTOR DYT1 12 204 - -
Mal7g3683 205 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 12 204 - -
Mal7g3683 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 104 IPR036638 GO:0046983
Mal7g3683 205 SMART finulus 47 96 IPR011598 GO:0046983
Mal7g3683 205 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 41 90 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3683 Mal-Chr7 102367364 102368698 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3683 42 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 41.899 6.82e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g3683 HLH 3.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3683 - - mtr:MTR_4g091910 198.364