Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3676 ATGGAACAAGTAAATAACAATAGACTATGTGTGTCAATGGAAGAGTTAGGTTTCAATGCTGAAAATGGTAGCAATAGGGGAAAATTGAGAAAGAACAAGCACCGTGAGAATGATGGTGGCATAAAAGTGTTCACATCCAAGAACCTTGAGACAGAAAGAAAGAGAAGGGAGAAACTCACTAGCAGACTTTTGGTGCTTCGGGCTTTAGTACCAATCATCACAAATATGAACAAAGCAAGCATTATTGAGGATGCTATCACTTATACCATGAAGTTGCAACGTGAAGTTGAGAGTCTCACACAAGAGCTAAATGGAATGGAAACACCAAGAGAGAAAAGAGTTGAGTCAAAAAAAAGAGTGTCTTCTGCTGCTGTTGAAGGGATGAATAAATTGGGGCTACAGGAAGAGGTGCAGATAGCAAAAATTGATGGGAATAAGCTATGGGTTAAGATGATTATTGAAAACAAGAGAGGAAGGTTCAAGAAATTAATTGAGGACTTGAATGCTTCAAACATTGAAATGGTAGACCTCAGTGTTACAACTATAGCAGGAGCATATCTTATTACAGCCTCCTTACAGGATATGGGTGGTGAACCACTTGAACTTTATCGAGTTCCAAATATCATCAAGTTCAATTAG 639 0.3834 MEQVNNNRLCVSMEELGFNAENGSNRGKLRKNKHRENDGGIKVFTSKNLETERKRREKLTSRLLVLRALVPIITNMNKASIIEDAITYTMKLQREVESLTQELNGMETPREKRVESKKRVSSAAVEGMNKLGLQEEVQIAKIDGNKLWVKMIIENKRGRFKKLIEDLNASNIEMVDLSVTTIAGAYLITASLQDMGGEPLELYRVPNIIKFN* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3676 212 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 9 206 - -
Mal7g3676 212 PANTHER TRANSCRIPTION FACTOR DYT1 9 206 - -
Mal7g3676 212 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 107 IPR036638 GO:0046983
Mal7g3676 212 Gene3D - 45 108 IPR036638 GO:0046983
Mal7g3676 212 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 92 IPR011598 GO:0046983
Mal7g3676 212 Pfam Helix-loop-helix DNA-binding domain 49 93 IPR011598 GO:0046983
Mal7g3676 212 SMART finulus 49 98 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3676 Mal-Chr7 102307271 102308780 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3676 44 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 47.134 1.66e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g3676 HLH 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3676 - - mtr:MTR_4g091910 340.887