Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3674 ATGGCGACCAATCTCCCAGAACACTTCAAATGTCCAATCTCACTCGAAATAATGTCCGACCCAGTAATCCTCTCTTCCGGTCACACATTCGATCGTCCTTCAATCCAACGTTGGATAAACGAAGGTCATCGAACTTGTCCAATTACCAAAATACCCCTTCCTGATACTCCTATTCTCATCCCTAACCACGCGCTTCGTAGCTTAATCCACAGTTACACACTCCTTCCACCACTTCATCAAATCATTTCACAACCTGAAACCCTAATTTCAACCCTAACCGTTAATTCTTCTTCCGATGATTCCAAAATTGATTCTCTCCGTCAACTCGCTCGTCTTTCTAAACGTGATGTCACTTTTCGCCGCCGTCTTGTTGATTCCGGTGCCGTCTCCGCTGTACTTTTCTGTCTTGATTCTTCCTCCGGCGACGGTGACACGAAATTGCAGGAGAAGGCTTTGTCTCTTCTTCTTAATCTCAGTCTTGATGATGATAGCAAAATTGGACTTGTTGCTGAAGGCGCAATTGGCAGAGTTGTGAATTTCCTCGTCGGAGCACCGTCGTCGGACTGTCGTGCTTTGGCGGCGACGATAATCACGAGTCTTGCTGTTGTGGAGGTGAATAAAGCAACAATCGGAGCTTTTCCCGGAGCAATTGAAGCTCTGGTGATGATTCTGCGTGATGGGAAGGGGAGAGAGAGGAAGGAAGCGGCGACCGCGCTTTACGCGCTTTGTTGTTTTCGTGATAATCGAAAAAGGGCGGTGGATTGTGGCGCGGTGCCGATTTTGTTGAGGAGTGTTGAATGTGGACTTGAAAGGGGTGTTGAGGTTATTGGTGTTTTAGCTAAGTGTAAGGAAGGGAGGGAGCATTTGGAGAGTTATGGTGGTTGTGTGAAGATTTTGGTGAGTGTGTTGAGGAATGGAAGTTCTAGAGGGATTCAATATGCATTGTTGGCACTTACTTTGGTTTGTTTGCATAGCAAGGAAATGCTTTTGGTGACTTTGCAAGAAGGGGTTTTGGAAATTTGTCTTGGGTTGGTAGAGGATGATAATGAGAAAGTTAGGAGAAATGCGTCCAATTTGGTTCGGGTTCTTCGCGGAGGAAATCACCACCGGATGAGTTGA 1119 0.4629 MATNLPEHFKCPISLEIMSDPVILSSGHTFDRPSIQRWINEGHRTCPITKIPLPDTPILIPNHALRSLIHSYTLLPPLHQIISQPETLISTLTVNSSSDDSKIDSLRQLARLSKRDVTFRRRLVDSGAVSAVLFCLDSSSGDGDTKLQEKALSLLLNLSLDDDSKIGLVAEGAIGRVVNFLVGAPSSDCRALAATIITSLAVVEVNKATIGAFPGAIEALVMILRDGKGRERKEAATALYALCCFRDNRKRAVDCGAVPILLRSVECGLERGVEVIGVLAKCKEGREHLESYGGCVKILVSVLRNGSSRGIQYALLALTLVCLHSKEMLLVTLQEGVLEICLGLVEDDNEKVRRNASNLVRVLRGGNHHRMS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3674 372 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 74 IPR013083 -
Mal7g3674 372 ProSiteProfiles U-box domain profile. 4 79 IPR003613 GO:0004842|GO:0016567
Mal7g3674 372 SMART Ubox_2 8 72 IPR003613 GO:0004842|GO:0016567
Mal7g3674 372 Pfam U-box domain 6 72 IPR003613 GO:0004842|GO:0016567
Mal7g3674 372 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 8 1 364 - -
Mal7g3674 372 Gene3D - 86 371 IPR011989 -
Mal7g3674 372 SMART arm_5 282 323 IPR000225 GO:0005515
Mal7g3674 372 SMART arm_5 161 202 IPR000225 GO:0005515
Mal7g3674 372 SMART arm_5 325 365 IPR000225 GO:0005515
Mal7g3674 372 SMART arm_5 116 160 IPR000225 GO:0005515
Mal7g3674 372 PANTHER U BOX DOMAIN-CONTAINING 1 364 - -
Mal7g3674 372 CDD RING-Ubox_PUB 9 50 IPR045210 -
Mal7g3674 372 SUPERFAMILY ARM repeat 66 363 IPR016024 -
Mal7g3674 372 SUPERFAMILY RING/U-box 3 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3674 Mal-Chr7 102287220 102288338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3674 1 365 U-box Gene Family AT4G21350 58.667 2.67e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3674 - - gmx:100785141 514.998