Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3673 ATGGGTAATGAGTTTTTCAAACAGAAGAAGTTTAAGGAAGCTATTGATTGCTATTCAAGGAGAATTGCCTTCTCACCAACTGCTGTAGCCTATGCAAACAGGGCAATGGCCCATATAAAGCTAAGAAGATTTCGAGAGGCTGAGGATGACTGTACAGAGGCCTTAAATCTCGATGACCGTTACATAAAAGCATACTCGCGGCGAGCAACAACTAGAAAAGAACTTGGCAAAAATAAGGAATCCATGGAGGATGCCGAGTTTGCCATGAGGTTGGAACCTAGCAATCAAGAAGTCAAGAAACAGTATGCTGATGCTAAGTCACTGTACAAGAAGACGAAGATTCGTGTCTGCCATGAATTCTTCAAACGTTACTTCAACAAGCTAAAGAAACATCCTTATGCATGGCTCATGGACCAAAATGAAAAATGTGTAAGAGTAAGGTTTGGACAATCAGAAGAACAAAATTTTGTCACCTCTGGTAGAGATGTTGCAGCAGCATTCCAATGGAACAAACCAACCAGGTTTAAGCTCGAATTTACTGGTAAATTCAATAGGTTCAAGATAGCTGTGGTGAACGACAACAATGCTCCTTCTGAAGAGGTAACAGTCAGGCAAGAGGTCATTGAAATTGACATTCGGAGGACATTGAAGACTATTACGACCCAGATTTGTATCACTTTGCAAAGGAAGTAA 693 0.4084 MGNEFFKQKKFKEAIDCYSRRIAFSPTAVAYANRAMAHIKLRRFREAEDDCTEALNLDDRYIKAYSRRATTRKELGKNKESMEDAEFAMRLEPSNQEVKKQYADAKSLYKKTKIRVCHEFFKRYFNKLKKHPYAWLMDQNEKCVRVRFGQSEEQNFVTSGRDVAAAFQWNKPTRFKLEFTGKFNRFKIAVVNDNNAPSEEVTVRQEVIEIDIRRTLKTITTQICITLQRK* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3673 230 Pfam Tetratricopeptide repeat 30 58 IPR019734 GO:0005515
Mal7g3673 230 PANTHER OS05G0129900 PROTEIN 2 134 - -
Mal7g3673 230 SUPERFAMILY TPR-like 1 136 IPR011990 GO:0005515
Mal7g3673 230 SMART tpr_5 62 95 IPR019734 GO:0005515
Mal7g3673 230 SMART tpr_5 28 61 IPR019734 GO:0005515
Mal7g3673 230 Gene3D Tetratricopeptide repeat domain 1 93 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3673 Mal-Chr7 102261098 102264644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3673 2 65 U-box Gene Family AT3G07370 41.538 4.85e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3673 K23002 - csin:114297283 198.749