Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3659 ATGGGAAGAGCACCTTGTTGTGAAAAGAATATTGGCCTCAAAAGAGGACCATGGACACAAGAGGAAGACCAAAAACTCATTGATTACATTCACAAACATGGCTATGGAAACTGGAGATTACTCCCAAAGAATGCTGGATTACAAAGATGTGGTAAGAGTTGTCGTCTCCGTTGGACAAACTATCTTCGACCGGATATAAAGCGAGGTCAATTCTCTTTTGAGGAAGAAGAAACCATAATTCAGCTGCATAGCATTCTTGGCAACAAGTGGTCTTCAATTGCTTCTAGGCTACCAGGAAGAACAGACAATGAAATCAAGAATTATTGGAACACTCACATTAGGAAAAGACTCTTAAGAATGGGAATTGATCCTGTGACACATAATCCACGTCTTGATCTTTTAGACCTATCTTCTATTCTAAATTCATCTCTCTATGCCTCTGCCTCATCACAAATGAACATTCGAAGGCTAATTGGTACACATCAATTAGTGAATCCTGAGATTCTAAAGTTGGCTTCATCACTTTTCTCCTCTCAAAATGGACAAGAGAATCAACAAATCTCACAATTGGTTCAGGACTCAACTCATCAAGAAGATTGCAACATGTTGTTGAATCCAATTTGTGATAATTCAATGCCTTTCACACAAACACACTTGGTTGAATCCAATGAGAATCTATACTCATCATTTTTACCTGAATTTGGCTTCCAACAACATAATGAGAGTGTTCAATTAAGTGATTTGCATTGCAATGGAATTGCTTCAAGTAATGTAACAGAAGATTTTGTTCATCAATTACCATGCTATAACCACTTAAGTTCTGATTATCATGCGAATAATTTAATTATGGACCCTCACATATCAGAAACTTCAACCTTTCATTGCAATAACAACAACCAGAATTTCAATTTCGCTTCGGTTTTATCTACACCTTCATCAAGTCCAACACCGTTGAATTCGAATTCCACGAATATCAATGGAAGCAGTACTGAAGATGAGATCGGGAGCTATGTTAGCAGCAACATGTTTGAATTTCATGTCTCAGATATCTTAGGTGTGAATGAGTTCATGTAA 1074 0.3715 MGRAPCCEKNIGLKRGPWTQEEDQKLIDYIHKHGYGNWRLLPKNAGLQRCGKSCRLRWTNYLRPDIKRGQFSFEEEETIIQLHSILGNKWSSIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHNPRLDLLDLSSILNSSLYASASSQMNIRRLIGTHQLVNPEILKLASSLFSSQNGQENQQISQLVQDSTHQEDCNMLLNPICDNSMPFTQTHLVESNENLYSSFLPEFGFQQHNESVQLSDLHCNGIASSNVTEDFVHQLPCYNHLSSDYHANNLIMDPHISETSTFHCNNNNQNFNFASVLSTPSSSPTPLNSNSTNINGSSTEDEIGSYVSSNMFEFHVSDILGVNEFM* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3659 357 CDD SANT 71 113 IPR001005 -
Mal7g3659 357 Gene3D - 15 67 - -
Mal7g3659 357 Gene3D - 70 117 - -
Mal7g3659 357 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Mal7g3659 357 PANTHER TRANSCRIPTION FACTOR MYB102 1 352 - -
Mal7g3659 357 SMART sant 14 64 IPR001005 -
Mal7g3659 357 SMART sant 67 115 IPR001005 -
Mal7g3659 357 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mal7g3659 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Mal7g3659 357 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Mal7g3659 357 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Mal7g3659 357 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mal7g3659 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Mal7g3659 357 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 352 - -
Mal7g3659 357 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3659 Mal-Chr7 102002377 102003733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3659 1 357 MYB Transcription Factor Family AT4G21440 55.789 2.05e-121 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g3659 Myb_DNA-binding 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3659 K09422 - gmx:778071 422.935