Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3579 ATGTACGTGGGTTCTTCCATGCGCAAGTCTTTCAAGGACTCCTTAAAACTACTTGAAGCTGATATCCAACACGCCAATACTCTGGCGTCAGATTTTCCAAGGGAGTATGATGGTGCAAGTCTTCAGATGAGAATGTCATACAGTCCAGCTGCACACTTGTTTCTCTTTTTCGTTCAATGGACTGATTGCCATCTTGCTGGAGCTCTTGGATTGTTAAGAATCCTAATCTACAAGGTGTATGTGGATGGAACAACCACCATGTCTACCCATGAAAGAAAAGCAAGTATAAGGGAATTCTATGCTGTCATCTATCCCTCTTTATTGCAACTTGAGAAGGGGGTCACTGATTCTGAGGATAAAAAGCAGAAGGCTGCATGCATGGAGAGGTATCGTCGAAGAGATGATGAGGATTGTAGGCAATCTTCTGACATTGACATTGAAAGAGAAGATGAATGTGGGATATGCATGGAGATGAATAGTAAAATTGTGTTGCCCAACTGTAATCATGCTATGTGCCTCAAATGTTACCGAGAATGGCGAACAAGATCACAGTCGTGCCCATTTTGCCGTGACAGTCTGAAGAGAGTGAACTCAGGGGATCTCTGGGTATACACTGATAGAAGGGATGTGGTTGATATGGCAACAGTGACAAGGGAGAATCTCAGAAGGCTTTTCATGTACATAGATAAGTTGCCTTTGATTGTTCCAGACTCCCTCTTTGACACGTATGATTCTCACATAAGGTAA 747 0.4284 MYVGSSMRKSFKDSLKLLEADIQHANTLASDFPREYDGASLQMRMSYSPAAHLFLFFVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDSEDKKQKAACMERYRRRDDEDCRQSSDIDIEREDECGICMEMNSKIVLPNCNHAMCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVYTDRRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFDTYDSHIR* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3579 248 SUPERFAMILY RING/U-box 141 195 - -
Mal7g3579 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 199 IPR013083 -
Mal7g3579 248 PANTHER RING FINGER PROTEIN 41, 151 3 248 - -
Mal7g3579 248 ProSitePatterns Zinc finger RING-type signature. 167 176 IPR017907 -
Mal7g3579 248 SMART ring_2 152 189 IPR001841 -
Mal7g3579 248 Pfam Zinc finger, C3HC4 type (RING finger) 149 195 - -
Mal7g3579 248 ProSiteProfiles Zinc finger RING-type profile. 152 190 IPR001841 -
Mal7g3579 248 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF8-LIKE 3 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3579 Mal-Chr7 101031863 101035326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3579 144 193 C3H Transcription Factor Family AT5G41350 40.741 4.42e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3579 K25840 - gmx:100777318 465.692