Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3573 ATGAGTGTAAATGTGATGGAGCTAAACTTTGGTTCATTAGACAAATTTTCTTCTGATCAAGATGGCTTGTCCCTTAGGCCATTAAAGTGCCCTGCACCATTTCTATTGAAGACCTATGATTTGTTGGAAGAAGGTAGTGAAGGTGAAGATGGCATTAAAATTGTGTCATGGAATGAAGAAGGAAATGGTTTTGTTGTGTGGTCTCCAGCTGAATTCTCAGAACTCATCTTGCCTAGATATTTCAAGCACAACAATTTCTCTAGCTTTATTCGACAACTGAATACATATGGATTTAAGAAAATATCATCTAAAAGATGGGAATTCCAGCACGAGAAGTTTCAAAAGGGTTGCAGGCACATGTTGGTAGAAATCAGTAGGAAAAAGTGTGAGCCAAGTGTGTTTCCTCAATACCTCAAGTCTTGTTCAGAGGAAAATGCAATGACTAGTTCATCACTGGAAGAAAACAATAACAATCATGAACTACTCATGGAGGAGAACAAGAACCTAAAGAGGGAGAGATTAGAGTTGCAAATGCAAATAGCTGAATGCAAGGCACTGGAAATGAAGTTGTTGGAGTGCCTCTCTCAATATATGGATACCCGCCAAAATAAAGTCAGGAGACTATGTTAA 630 0.3841 MSVNVMELNFGSLDKFSSDQDGLSLRPLKCPAPFLLKTYDLLEEGSEGEDGIKIVSWNEEGNGFVVWSPAEFSELILPRYFKHNNFSSFIRQLNTYGFKKISSKRWEFQHEKFQKGCRHMLVEISRKKCEPSVFPQYLKSCSEENAMTSSSLEENNNNHELLMEENKNLKRERLELQMQIAECKALEMKLLECLSQYMDTRQNKVRRLC* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3573 209 Gene3D - 28 128 IPR036388 -
Mal7g3573 209 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g3573 209 PRINTS Heat shock factor (HSF) domain signature 89 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g3573 209 SUPERFAMILY "Winged helix" DNA-binding domain 31 127 IPR036390 -
Mal7g3573 209 SMART hsfneu3 30 127 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g3573 209 Pfam HSF-type DNA-binding 34 127 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g3573 209 ProSitePatterns HSF-type DNA-binding domain signature. 77 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g3573 209 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2A-LIKE 27 209 - -
Mal7g3573 209 Coils Coil 152 189 - -
Mal7g3573 209 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 27 209 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3573 Mal-Chr7 100972656 100974420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3573 30 201 HSF AT5G62020 35.000 1.43e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal7g3573 HSF_DNA-bind 7.9e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3573 K09419 - gmx:100789792 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3573 7 100972656 100974420 Mal7g3573 7 100972656 100974420 ECH