Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3558 ATGAAATTCAGTGACAAGTCAAAGAACCGAAAGGAGTCAGGATGGACAAAGTATTTTGATCACGGTGGAGGAAAAGTTACTGCGGTTGAAACTGCTGAAGAATGGAATGTTGACCTCTCTAAGCTCTTAGTTGGTCTTAGGTTTGCTTCTGGAGCTCAAAGTAGGCTTTACCATGGTAGGTATGAAGATGAACCTGTTGCTGTGAAAATTATCAGGGTACCAGATGATGATGATGAAAGAGGAACTTTGGCTGCTAAATTAGAGAAACAGTTCGTCACAGAAGTCAAGCTTTTATCTCGCCTCCACCATCAAAATGTTCTTAAGTTTGTAGCAGCTAGCAGAAAGCCACCTGTTTATTGTGTTATCACAGAATATCTATCAGAAGGTTCGTTGAGGGCATATTTGCACAAGTTGGAGGGAAAAACTATTTCTCTACAGAAGCTAATTGCTTTTTCTCTGGATATTGCTCATGGAATGGAATATATACACTCTCAAGGTGTCGTTCATCGAGACCTTAAACCAGAGAATGTCCTTATTAATGAAGACTCTCATCTTAAAATTGCTGATTTTGGCATTGCTTGTGAGGAAGAATACTGCGACTTACTTGCTGACGACGCCGGTACCTACCGCTGGATGGCACCTGAGATGATCAAAAGAAAATCTTATGGGAGAAAGGTTGATGTGTATAGTTTTGGGCTTATCTTATGGGAGATGCTTACTGGTAGATTACCATATGAGGATTTGTCTCCCGTCCAGGCTGCTTTTGCTGTCGTAAATAAGAATCTAAGGCCCGTTATTCCTTCAAGCTGCCCACCAGCTATGCGAGCTTTGATTGAGCAATGTTGGTCCTTGAATCCAGACAAAAGGCCTGAGTTCTCGCAAGTTGTTAAGGTGTTAGAGCAATTTGAATCTTCGCTTGCTCGTGATGGAACATTGCCCCTGCTGCTACAAAACCTTTGTGGCCAAGATCATAAAAAAGGGCTTCTTCGTTGGATAAAAAAGCTTAATCCTGCACATCATAGTAGCGGTTATGCGCCTAAACCAAAATTTACAAGAATCTTCTGA 1065 0.415 MKFSDKSKNRKESGWTKYFDHGGGKVTAVETAEEWNVDLSKLLVGLRFASGAQSRLYHGRYEDEPVAVKIIRVPDDDDERGTLAAKLEKQFVTEVKLLSRLHHQNVLKFVAASRKPPVYCVITEYLSEGSLRAYLHKLEGKTISLQKLIAFSLDIAHGMEYIHSQGVVHRDLKPENVLINEDSHLKIADFGIACEEEYCDLLADDAGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMLTGRLPYEDLSPVQAAFAVVNKNLRPVIPSSCPPAMRALIEQCWSLNPDKRPEFSQVVKVLEQFESSLARDGTLPLLLQNLCGQDHKKGLLRWIKKLNPAHHSSGYAPKPKFTRIF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3558 354 PRINTS Tyrosine kinase catalytic domain signature 226 248 IPR001245 GO:0004672|GO:0006468
Mal7g3558 354 PRINTS Tyrosine kinase catalytic domain signature 161 179 IPR001245 GO:0004672|GO:0006468
Mal7g3558 354 PRINTS Tyrosine kinase catalytic domain signature 207 217 IPR001245 GO:0004672|GO:0006468
Mal7g3558 354 PRINTS Tyrosine kinase catalytic domain signature 123 136 IPR001245 GO:0004672|GO:0006468
Mal7g3558 354 PRINTS Tyrosine kinase catalytic domain signature 270 292 IPR001245 GO:0004672|GO:0006468
Mal7g3558 354 Gene3D Transferase(Phosphotransferase) domain 1 128 313 - -
Mal7g3558 354 Pfam Protein tyrosine and serine/threonine kinase 49 299 IPR001245 GO:0004672|GO:0006468
Mal7g3558 354 SUPERFAMILY Protein kinase-like (PK-like) 27 299 IPR011009 -
Mal7g3558 354 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 326 - -
Mal7g3558 354 CDD STKc_MAP3K-like 49 299 - -
Mal7g3558 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Mal7g3558 354 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 326 - -
Mal7g3558 354 Gene3D Phosphorylase Kinase; domain 1 30 127 - -
Mal7g3558 354 SMART serkin_6 42 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g3558 354 ProSiteProfiles Protein kinase domain profile. 42 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3558 Mal-Chr7 100757920 100760721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3558 1 351 MAP Kinase Kinase Kinase AT5G58950 63.260 1.08e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mal7g3558 PK_Tyr_Ser-Thr 2.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3558 - - gmx:100784454 592.423