Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3549 ATGGACGGCACGGCGTTCTCTTCTGAATCGAAATATCCTCCTCTGTTTCAGGCCAAACGCAAGATCGACGACACGTCTGTCTCCTCTGAATCCAAATATCCTGCTCTGGCTGAGGCCAAAGCCAAGATCAAGCTCAAGGACCCGGACATTCTCGACTTGTTTGAAGAATGTTTCCACCCTGACGTTGTTTTTGAACCTTGTTGTCACGATCACAATCACAATCTTTATCTTTCTGATGATGAGGAGGAGGAGGATGAGGATGATGATGTAATGATTGGAGATTACTATATACCTACCTATCTGCGATATTTTTTGGATGAGATGACTTCTGGTTCTGGGCCCTATAATGAGAAGACCAATTCTGTTGTGGTGACCAACATCCAGTGCTTCACAGATAAAACTAAATTGATTGATCTTTTCCGTCCTTTTGGTGCGATCGAGGCTGATGTTGCTATTGATAGAGAGACTGACACTCCTGAGTGCTTTGGCTTTGTTAAATTTCCTACCAGGGAACAAGCTCAGAAGGTTATTGATATGGGGCGGTTTGTCTACCGCGATTATTTCTCCCTTGGAGTTCAATGGGTCACCCCAAAAACAACCTAA 603 0.4411 MDGTAFSSESKYPPLFQAKRKIDDTSVSSESKYPALAEAKAKIKLKDPDILDLFEECFHPDVVFEPCCHDHNHNLYLSDDEEEEDEDDDVMIGDYYIPTYLRYFLDEMTSGSGPYNEKTNSVVVTNIQCFTDKTKLIDLFRPFGAIEADVAIDRETDTPECFGFVKFPTREQAQKVIDMGRFVYRDYFSLGVQWVTPKTT* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3549 200 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 122 179 IPR000504 GO:0003723
Mal7g3549 200 Gene3D - 112 200 IPR012677 -
Mal7g3549 200 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 120 197 IPR000504 GO:0003723
Mal7g3549 200 SUPERFAMILY RNA-binding domain, RBD 112 198 IPR035979 GO:0003676
Mal7g3549 200 SMART rrm1_1 121 193 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3549 Mal-Chr7 100650101 100651173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3549 96 199 Eukaryotic Initiation Factors Gene Family AT5G06000 41.509 5.99e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3549 K03248 - ath:AT5G06000 68.9366