Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3541 ATGGCTGCTTCACCTTCTTCAGCTCTCAATTCTCTCTCTTCTCTATCCTTCCGTTCTTCTTCCTCCTCCTCTCGTTTCTCTCTCCTCCCCACAACCCACAAACTCACATTCCCTCTCACCAAAACCCCATTCTCCCTCTCCTTCACCGCCAAATCCACTCCCTCCGACGAACCCTTATTCGACGCCGCCATCCCGGAAGAATCCCTTCCCTTCAACCCACCAGAAATTCCCGAAGGTTTCATCCCACCACCTTCCATTGACGACGGACCAGTCGAAAACGAAGACGAAATCGCCTCCGCATACGAAGAGCTATACGGTGTAGCGTACAGTGGCGTCAGTGTGCTTGGAAATGATATATATGTGATGGATTCGAAGGCGAGGAAGAAGACGGGGTTCGGTTCGGGTGCGAAGATGGAAAAGATAAGAGATGGGTTGGAAGAAAGAGTGGTTCAAGTGAGAAGGGTTACTAAGGTTGTTAAAGGAGGGAAACAAATGAGTTTTAGAGCTATTGTTGTTGTTGGTGATAAGAAAGGACGAGTTGGTGTTGGTGTTGGTAAGGCTAAGGAAGTTGTTTCTGCTGTTCAGAAATCTGCTATTAATGCTAGGAGGAATCTTATTAGAGTTCCTATGACTAAGTACTTGACTTTTCCTCATAGAGCTGACGGAGATTATGGAGCAGCAAAGGTGATGCTAAGACCTGCTTCTCCTGGTACCGGAGTTATTGCGGGTGGGTCTGTGAGAATTGTTCTTGAAATGGCAGGTGTTGAGAATGCTTTGGGGAAACAACTAGGAAGTGACAATGCACTCAACAATGCCAGAGCAACTGTTGTTGCAGTGCAGAAAATGAAGCAGTACAGTGAGGTCGCTGAGGAGCGTGGGATCCCTATGGAAGAGTTATGGAAGTAA 906 0.4735 MAASPSSALNSLSSLSFRSSSSSSRFSLLPTTHKLTFPLTKTPFSLSFTAKSTPSDEPLFDAAIPEESLPFNPPEIPEGFIPPPSIDDGPVENEDEIASAYEELYGVAYSGVSVLGNDIYVMDSKARKKTGFGSGAKMEKIRDGLEERVVQVRRVTKVVKGGKQMSFRAIVVVGDKKGRVGVGVGKAKEVVSAVQKSAINARRNLIRVPMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSDNALNNARATVVAVQKMKQYSEVAEERGIPMEELWK* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3541 301 SUPERFAMILY Ribosomal protein S5 domain 2-like 215 293 IPR020568 -
Mal7g3541 301 MobiDBLite consensus disorder prediction 1 25 - -
Mal7g3541 301 PANTHER 30S RIBOSOMAL PROTEIN S5, CHLOROPLASTIC 40 301 - -
Mal7g3541 301 Gene3D - 136 206 - -
Mal7g3541 301 Pfam Ribosomal protein S5, N-terminal domain 145 209 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mal7g3541 301 ProSitePatterns Ribosomal protein S5 signature. 162 194 IPR018192 -
Mal7g3541 301 Hamap 30S ribosomal protein S5 [rpsE]. 122 298 IPR005712 GO:0003735|GO:0006412|GO:0015935
Mal7g3541 301 Gene3D - 212 300 IPR014721 -
Mal7g3541 301 PANTHER RIBOSOMAL S SUBUNIT 40 301 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mal7g3541 301 SUPERFAMILY dsRNA-binding domain-like 141 210 - -
Mal7g3541 301 ProSiteProfiles S5 double stranded RNA-binding domain profile. 145 208 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mal7g3541 301 TIGRFAM rpsE_bact: ribosomal protein uS5 144 298 IPR005712 GO:0003735|GO:0006412|GO:0015935
Mal7g3541 301 Pfam Ribosomal protein S5, C-terminal domain 222 292 IPR005324 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3541 Mal-Chr7 100535309 100537593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3541 145 301 Cytoplasmic Ribosomal Protein Gene Family AT2G41840 30.909 8.76e-16 74.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3541 7 100535309 100537593 Mal7g3541 7 100535309 100537593 ECH