Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3531 ATGTCAGAAAATAAGTGCTCTCATGAGTCTCTCAAAGAGAATGAGGAGACTAAAAATGAGCTAAACAACTTGCAGAAGCAACCCAAAGATGAAGTTGGATCAGATCAAATGCTTGCATCTGACAATCAAGAAGAACAAAACCAAGAACAAAAAGAAGATGTTGATGACAATGATGATGCTGATGAACAAGATAAAGCTGAAGAAGAAAACTATGTGATCGTAAATTTGTCAGAAATACATGAGGACATTGAGTGCCCTATTTGCTTTGGTATCATTCGAAACGCAAAAACTGTAATGGCATGCTTGCATCGTTTCTGTGGAGAGTGCATAGAGAAGTGCATACGCGTTGGTAAAAATGAATGTCCTCTTTGTCGCACAAGTTGTAGCCAACTCTCACTGAGAGATGATCCAAACTATGATGCATTGATTGCTGTGCTGGTTCCAGATATTGACTTGTTTGAGAATGAGGAATTGGCTTCGCTTAACGAAGAGTTTCCTCAACTAGTGAATCAAGAACCTAAGGAAGTTGTTGATCTTGAAGAAGAAGAAGAATTTGTTGAAGAATATATTGCTGCTCAACAATTTGTGATGGCTCTACCTGCTTTTCATCATCTGTATGATATTTTTTTTGATGAAGAATTTGTTGTTGATGAAGAGGAAGATAGCGATACAACTTGGACCATATCAGATAGTGATGATGATGATGATGATGATGATACTTCTGTAGAGTAA 732 0.373 MSENKCSHESLKENEETKNELNNLQKQPKDEVGSDQMLASDNQEEQNQEQKEDVDDNDDADEQDKAEEENYVIVNLSEIHEDIECPICFGIIRNAKTVMACLHRFCGECIEKCIRVGKNECPLCRTSCSQLSLRDDPNYDALIAVLVPDIDLFENEELASLNEEFPQLVNQEPKEVVDLEEEEEFVEEYIAAQQFVMALPAFHHLYDIFFDEEFVVDEEEDSDTTWTISDSDDDDDDDDTSVE* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3531 243 MobiDBLite consensus disorder prediction 1 25 - -
Mal7g3531 243 MobiDBLite consensus disorder prediction 26 44 - -
Mal7g3531 243 MobiDBLite consensus disorder prediction 219 243 - -
Mal7g3531 243 MobiDBLite consensus disorder prediction 1 65 - -
Mal7g3531 243 SUPERFAMILY RING/U-box 70 131 - -
Mal7g3531 243 ProSiteProfiles Zinc finger RING-type profile. 85 125 IPR001841 -
Mal7g3531 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 151 IPR013083 -
Mal7g3531 243 Coils Coil 7 27 - -
Mal7g3531 243 MobiDBLite consensus disorder prediction 48 65 - -
Mal7g3531 243 PANTHER OS11G0578200 PROTEIN 9 194 IPR044592 -
Mal7g3531 243 SMART ring_2 85 124 IPR001841 -
Mal7g3531 243 Pfam Zinc finger, C3HC4 type (RING finger) 84 124 - -
Mal7g3531 243 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1A-RELATED 9 194 - -
Mal7g3531 243 CDD RING-HC_RING1_like 85 125 - -
Mal7g3531 243 ProSitePatterns Zinc finger RING-type signature. 101 110 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3531 Mal-Chr7 100439253 100443313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3531 61 137 RAD5 or RAD16-like Gene Family AT5G05130 36.364 4.16e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3531 K10695 - rcu:8258442 144.821