Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3530 ATGCCGGCACAGAAGCGTTCTTTCGAAGAAGCTCTCGAAGAAAATGACGACTCTGAAAACGAGATAAACAACGATGAAGTTGAATCGGATAAAAGACATTCATCTGAAAACGACGAAGAAGATGAAGAAGAAGAAGATGATGACGAAGAATACGTGGCTGTAAAATTGTCAGATGTACGCAAGGAAGTTCAGTGTCCTATCTGCCTGGGCATCATTCGAAAAACAAGAACTGTAATGGAATGCTTGCATCGCTTCTGCAGAGAGTGCATAGACAAATCCATGCGCCTTGGTAACAATGAATGTCCAGCATGCCGTACACATTGTGCTAGCCGACGCTCACTCAGAGATGACCCAAACTATGATGCCTTGATCGCTGCGATCTATCCAGATATTGACAAGTACGAGGAAGAGGAATTGGCTTTGCATGAGGATGAGATGACTCGCCATAAGCAGTTCCAAGCATCTATTGCCCAAACGCTACAACGGCAATCAGAAGCATTGAGTAAGAAACGAAAAGCCAAAGCAGCAGCAGTGGCTTTTGTAAGGAGATCACAAGGCAAATATCGAACTTCACATCTAAGACGTCGAAGAAACTCTAGAAATGCTGGTGACTTTCAGGTATCCAATGACAACAACGGTATGGATGATAATGATGGTGGAAAGGACTCTTCTTCTGACGATGGGCAGACAGAAACCCAGCCAAGATGCAAAAGAGGTGGAGAACAAGAAACACAATTTCCTCAGCATTCTGCCTCTACTGATCTAGATGGAGTTGGTGATGAAAATACTCCAGAAGTGAATAGAGAAATCATAAGTGCATCTGGTACACTTTCCTGGGGGAAAAATGGTCACCGGAGTCACAGCCGAGTCAATGGAAAGAATGCCAAAAACAATCGCATCTCCAAATTGGTTGAATATCTTCGCAACTCGGAAGCAAATGGTTATGAGCTGCCTGCCTTTCTCATGCTTGTCTCATTTGATGAGCAAAGAATGCCAAGTTTGGAGGAGCCATGCCTTACTTGCAAGCCTACTATGTCAGTCAAGGAACTGTGCAAGCATGTTGCAAATGAAACTGCAATGCCTGCGGATGAAGTTGAATTGTGGTTGGTGCAGAAGCCACGAGCTAGCATTGTAGGAGGCGAAAGAACCATTTATCCAGACAGAGATAATTTACGCATTCTAGGAGACCAAGAAACATTGGCTGAATTGATGGGGGATTATGAAAATACCAACTATTGTTATCTGGTCATGGCTTACAAGAGGAAGTTGCAGAATTCAAGCTGA 1284 0.4377 MPAQKRSFEEALEENDDSENEINNDEVESDKRHSSENDEEDEEEEDDDEEYVAVKLSDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAAIYPDIDKYEEEELALHEDEMTRHKQFQASIAQTLQRQSEALSKKRKAKAAAVAFVRRSQGKYRTSHLRRRRNSRNAGDFQVSNDNNGMDDNDGGKDSSSDDGQTETQPRCKRGGEQETQFPQHSASTDLDGVGDENTPEVNREIISASGTLSWGKNGHRSHSRVNGKNAKNNRISKLVEYLRNSEANGYELPAFLMLVSFDEQRMPSLEEPCLTCKPTMSVKELCKHVANETAMPADEVELWLVQKPRASIVGGERTIYPDRDNLRILGDQETLAELMGDYENTNYCYLVMAYKRKLQNSS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3530 427 PANTHER OS11G0578200 PROTEIN 1 424 - -
Mal7g3530 427 MobiDBLite consensus disorder prediction 37 51 - -
Mal7g3530 427 ProSiteProfiles Zinc finger RING-type profile. 65 105 IPR001841 -
Mal7g3530 427 Pfam Zinc finger, C3HC4 type (RING finger) 64 104 - -
Mal7g3530 427 Coils Coil 8 28 - -
Mal7g3530 427 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 134 IPR013083 -
Mal7g3530 427 SMART ring_2 65 104 IPR001841 -
Mal7g3530 427 MobiDBLite consensus disorder prediction 243 257 - -
Mal7g3530 427 MobiDBLite consensus disorder prediction 1 51 - -
Mal7g3530 427 MobiDBLite consensus disorder prediction 186 263 - -
Mal7g3530 427 PANTHER OS11G0578200 PROTEIN 1 424 IPR044592 -
Mal7g3530 427 SUPERFAMILY RING/U-box 50 136 - -
Mal7g3530 427 ProSitePatterns Zinc finger RING-type signature. 81 90 IPR017907 -
Mal7g3530 427 CDD RING-HC_RING1_like 65 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3530 Mal-Chr7 100429971 100436292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3530 58 128 C3H Transcription Factor Family AT3G23060 35.135 7.68e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3530 K10695 - zju:107425269 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3530 7 100429971 100436292 Mal7g3530 7 100429971 100436292 ECH