Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3500 ATGGTAAAACCACTCCCTTTGATCTGCATTATGCTCTCAATCTTAACACTTGCAACAAACGTAGCATCTTTAAACCAAGAAGGTTTATACCTATACCAATTCAAACTAACCTTAGACGATCCAGACTCAACACTCTCTTCATGGAATCCACGAGATACCACACCATGTAACTGGTACGGTATACGCTGTGACTCCACAAACACCACCGTAACAGAACTTAACCTCTCCAACACCAACATTCAAGGCCCATTCACAGCCTCAATCCTCTGCCGTCTCCCTAATCTCTCCTCCATCAACCTCTTCAACAACTCCATTAACCAAACTTTCCCTCTTCAAATCTCTCTATGTAACAATCTCCTTCATCTTGATCTCTCCCAGAATCTCCTCACTGGTCCTCTCCCAGAATCTCTCTCCCTTCTTCCTAACCTTATTTACCTCGACCTTACAGGTAATAATTTCTCAGGTCCTATACCTTCATCTTTTGGAACATTCCAGAAACTTGAAATTCTCTCATTAGTTTCTAATCTTCTAGAAGGTACCATACCGGCTTCTCTTGGTAACATAACTACTTTAAAAATGCTTAACCTCTCTTACAACCCGTTTTTCCCGGGTCGGATTCCGTTAGAGCTTGGAAATTTAACAAACCTTGAAGTTCTTTGGTTAACACAATGTAACCTCGTCGGTGTAATTCCTGAAACACTTGGGAAGCTTAAGAAGCTTAAGGATTTGGACCTTGCTTTAAATGATTTATATGGTTCAATACCGAGTTCACTCACTGAGTTAACGAGTTTGAGGCAAATTGAGTTGTATAATAACTCGTTATCAGGTGAGTTACCGAAGGGAATGGGGAACTTGACGTCGTTGCGGCTTCTCGACGCGTCGATGAATCATTTAACGGGGAGGATTCCGGCGGAGCTTTGTTCATTGCCGTTGGAGAGTTTGAATCTATATGAGAATCGTTTTGAAGGTGAGTTACCGGCGAGTATTGCTGACTCACCGAATTTGTATGAGTTGAGGTTGTTTGGAAACAGGTTAACCGGAAAGTTGCCGGAGAATCTCGGGAAACGGTCGCCGTTAAGGTGGCTTGATGTTTCGAGTAATCAGTTTTGGGGGAGTATTCCGGCGAGTTTGTGTGATTTTGGTGAGTTGGAGGAGGTTTTGATGATATATAATTTGTTTACCGGTGAGATTCCGGCGAGTTTGGGGACTTGTCAGAGTTTGACGCGTGTGAGATTGGGTTATAATCGGTTTTCCGGTGAGGTTCCGGCGGGGATCTGGGGTCTTCCTCATGTTTATCTTTTAGAGCTTGCTCATAACTCGTTTTCTGGTTCTATTTCAAAGACTATTGCTGGAGCGGGGAACCTTTCGTTGTTGATATTGTCGAAAAATAATTTATCTGGAACTGTTCCTGATGAGGTTGGGTGGTTGGAAAATCTGGTTGAGTTTTCTGCCGGTGATAATATGTTCAGTGGTTCACTTCCTGATAGTTTGGTGAATCTTGGGCAGCTTGGGATTCTTGATTTTCACAACAATAGGCTCTCTGGGGAGCTTCCGAAGGGGATTCGTAGTTGGAAGAAGCTGAATGATTTGAATTTGGCTAACAATGAGATTGGTGGGAAGATTCCTGATGAGATTGGGAGTTTGTCTGTGCTTAATTTTCTTGATCTTTCTAGGAATCAATTTTCTGGGAAAATCCCTCATGGGTTGCAGAATCTGAAGCTGAATCAGCTTAATTTATCTTATAATCGTTTTTCTGGAGAACTACCTCCTCAATTGGCTAAGGAAATGTATAGGTTAAGTTTCCTTGGGAATCCTGGTTTGTGCGGAGATTTGAAAGGTTTGTGTGATGGTAGGAGTGAAGTGAAGAATTTGGGTTATGTATGGTTGCTTCGAGCAATTTTTGTTCTTGCTCTTTTGGTGTTCTTAGTTGGTGTTGTTTGGTTCTACTTTAGGTACAAGAATTTCAAGGACTCAAAACGGGCTATTGATAAGTCTAAATGGACGTTGATGTCGTTTCATAAACTGGGTTTTGGTGAGGAGGAGATTTTGAATTGTCTTGATGAAGATAATGTCATTGGAAGTGGCTCTTCCGGGAAGGTTTACAAGGTTGTACTTAATAGTGGAGAAGCCGTTGCTGTGAAGAAGATATGGGGAGGGGCTAGGAAGGAAGTGGAGAGTGGAGATGTTGAGAAAGGCAGGGTTCAAGACAATGCTTTTGATGCAGAGGTTGAAACTTTGGGAAAAATCAGACACAAGAACATTGTCAAGCTATGGTGTTGCTGTACCACTAGAGATTGCCAGCTTTTGGTTTATGAGTATATGCTAAATGGTAGTCTTGGTGATTTGCTTCATAGCAGTAAAGGAGGGTTGTTGGATTGGCCAACAAGATACAAGATAGCCGTGGATGCTGCAGATGGACTTTCTTATCTGCATCATGACTGTGTTCCCCCAATTGTTCATCGAGATGTTAAATCTAACAATATCTTGTTGGATGGGGACTTTGGTGCAAGAGTGGCAGATTTTGGACTAGCTAAAGTAGTCGAAACCACTGCGAAAGGAATTAAATCCATGTCCATCATAGCTGGTTCTTGTGGCTATATTGCACCAGAATATGCATACACACTTAAAGTGAATGAGAAGAGCGACATTTATAGTTTTGGTGTTGTTATACTTGAGTTGGTTACCGGAAGACGCCCTGTGGATCCTGAATTTGGAGAGAAAGATTTGGTTAAATGGGTTTGCACTACATTGGATCAAAAAGGTGTAGACCATGTACTTGACTCAAGGCTTGATTCATGTTTCAAAGAAGAGATTTGCAAGGTCTTCAACATTGGCCTCATGTGTACTAGTCCTCTTCCAATCAACCGGCCTTCAATGAGAAGAGTAGTGAAGATGTTGCAAGAGGTAGGAATAGAGAACCAAATGAAACCTGCCAAGAAAGATGGAAAATTAACCCCTTATTACTATGATGATACCTCAGATCATGGAAGTGTTGCTTGA 3000 0.4183 MVKPLPLICIMLSILTLATNVASLNQEGLYLYQFKLTLDDPDSTLSSWNPRDTTPCNWYGIRCDSTNTTVTELNLSNTNIQGPFTASILCRLPNLSSINLFNNSINQTFPLQISLCNNLLHLDLSQNLLTGPLPESLSLLPNLIYLDLTGNNFSGPIPSSFGTFQKLEILSLVSNLLEGTIPASLGNITTLKMLNLSYNPFFPGRIPLELGNLTNLEVLWLTQCNLVGVIPETLGKLKKLKDLDLALNDLYGSIPSSLTELTSLRQIELYNNSLSGELPKGMGNLTSLRLLDASMNHLTGRIPAELCSLPLESLNLYENRFEGELPASIADSPNLYELRLFGNRLTGKLPENLGKRSPLRWLDVSSNQFWGSIPASLCDFGELEEVLMIYNLFTGEIPASLGTCQSLTRVRLGYNRFSGEVPAGIWGLPHVYLLELAHNSFSGSISKTIAGAGNLSLLILSKNNLSGTVPDEVGWLENLVEFSAGDNMFSGSLPDSLVNLGQLGILDFHNNRLSGELPKGIRSWKKLNDLNLANNEIGGKIPDEIGSLSVLNFLDLSRNQFSGKIPHGLQNLKLNQLNLSYNRFSGELPPQLAKEMYRLSFLGNPGLCGDLKGLCDGRSEVKNLGYVWLLRAIFVLALLVFLVGVVWFYFRYKNFKDSKRAIDKSKWTLMSFHKLGFGEEEILNCLDEDNVIGSGSSGKVYKVVLNSGEAVAVKKIWGGARKEVESGDVEKGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCQLLVYEYMLNGSLGDLLHSSKGGLLDWPTRYKIAVDAADGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGLAKVVETTAKGIKSMSIIAGSCGYIAPEYAYTLKVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDHVLDSRLDSCFKEEICKVFNIGLMCTSPLPINRPSMRRVVKMLQEVGIENQMKPAKKDGKLTPYYYDDTSDHGSVA* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3500 999 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 981 - -
Mal7g3500 999 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Mal7g3500 999 PANTHER LRR RECEPTOR-LIKE KINASE 7 981 - -
Mal7g3500 999 Gene3D Transferase(Phosphotransferase) domain 1 774 990 - -
Mal7g3500 999 Gene3D Ribonuclease Inhibitor 311 617 IPR032675 -
Mal7g3500 999 SUPERFAMILY L domain-like 390 609 - -
Mal7g3500 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Mal7g3500 999 SMART serkin_6 686 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g3500 999 Pfam Protein kinase domain 688 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g3500 999 SMART LRR_typ_2 500 524 IPR003591 -
Mal7g3500 999 SMART LRR_typ_2 92 116 IPR003591 -
Mal7g3500 999 SMART LRR_typ_2 285 309 IPR003591 -
Mal7g3500 999 SMART LRR_typ_2 140 166 IPR003591 -
Mal7g3500 999 SMART LRR_typ_2 213 236 IPR003591 -
Mal7g3500 999 SMART LRR_typ_2 261 284 IPR003591 -
Mal7g3500 999 SMART LRR_typ_2 548 571 IPR003591 -
Mal7g3500 999 SUPERFAMILY Protein kinase-like (PK-like) 679 967 IPR011009 -
Mal7g3500 999 Pfam Leucine Rich Repeat 142 162 IPR001611 GO:0005515
Mal7g3500 999 Gene3D Ribonuclease Inhibitor 24 179 IPR032675 -
Mal7g3500 999 Gene3D Ribonuclease Inhibitor 180 282 IPR032675 -
Mal7g3500 999 Gene3D Phosphorylase Kinase; domain 1 670 773 - -
Mal7g3500 999 SUPERFAMILY RNI-like 72 438 - -
Mal7g3500 999 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Mal7g3500 999 ProSiteProfiles Protein kinase domain profile. 686 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3500 Mal-Chr7 100107494 100110891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3500 21 999 Receptor kinase-like Gene Family AT1G28440 70.892 0.0 1425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal7g3500 Pkinase 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3500 - - gmx:100819887 1672.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3500 7 100107494 100110891 Mal7g3500 7 100107494 100110891 ECH
Mal4g4028 4 115943814 115947227 Mal7g3500 7 100107494 100110891 ECH