Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3472 ATGGCTCCAAGGAATAAACATTGGCCTAGCTTGTTCAAAAAGTCAAGCTATTCGTCCAACAATCAGACTAGGCGCATCAACTCACTCTTGACTGGTTTGGATGATGAAGAGAGAACTCCTCAACCAAGGCCAAGATGGAACCCTAAGCCGGAGCAAATCCGCATTCTTGAAAGCCTCTTCAACTCAGGGACGGTGAGTCCATCAAGAGAGGAGATTACGAAAATACGCAAGCAATTACAAGAGTTTGGCGAAGTTGGTGACGCTAGTGTATTTTACTGGTTTCAAAACCGCAAGTCCAGAAGCAAAAGGAAAAGAATTCCCTACAACGAGAAACCAGAAGCACAACAAAACTCTACTACTCCATGTAACTCTCTCCCAGAAACCATCACACCACCACCCAACTCATCTTCAGCATCTTCCTCCGATCATCAAAAAGTCTCTCCCAATCCCAATGAAATCACAATATCTGAAAATATTGGATCCTCCAATATTAATGATGAGATAGTAGTGTTGCCTGATTCACCTGCAGTATCTCTGAACCAAAACCAAGCTGATGATTATTTTCACACCCCCGCTGAAACTGATTTACTACTACCTACACCCCCAATTTTCTCTTTCCCAATGGAGAATCATATTAATGAAGGGGTGGTGTCTAATGCCATGACAACACCACAGGACTTTGATGACTTATCTGATTTCGCCGATATAATTCAACCCTTCCTTAATCATGAGAGCATCAAGAACTATGGAAATGAAAATGGAATCTTCGACTCAATGGATGGCCAATATAATCAAGAGAATATTCAAGAGGAAACAATGAATATGATGATGCACTTGCACCAACAAGACCCACAACTTAGCTTTGGTGTCACAGCAGCTTCAAGCAATGATGATCATTCAACTGATCTTGCTCCTTTTCCTCCCAATGAAATTTATGAACCTGTTGATGATGTTCCATTCCTCATTGCTGATCAACCTCAAGGTTTTGGTGAAGAAGATGGTACTGGAAAATGTAGGGTGATTACTAATGACGATGTATTCGAGGTTAATGCGGGGCTCTTTAACGTTCGGGAATTCTTTGGAGATGGAGCATTTCTGGTTGACACCTCCTCCGGTATTCCGGTTCTAACCGATGAGTGGGGTGTCACCCTACTCCACCATGGGGCTAATTATTATCTGGTTAATGGCAGACACATTGTCTATCAGCAACTCCATGTTTTCTTCTGTGTCAAGCTTCAATTCACTTAG 1248 0.4223 MAPRNKHWPSLFKKSSYSSNNQTRRINSLLTGLDDEERTPQPRPRWNPKPEQIRILESLFNSGTVSPSREEITKIRKQLQEFGEVGDASVFYWFQNRKSRSKRKRIPYNEKPEAQQNSTTPCNSLPETITPPPNSSSASSSDHQKVSPNPNEITISENIGSSNINDEIVVLPDSPAVSLNQNQADDYFHTPAETDLLLPTPPIFSFPMENHINEGVVSNAMTTPQDFDDLSDFADIIQPFLNHESIKNYGNENGIFDSMDGQYNQENIQEETMNMMMHLHQQDPQLSFGVTAASSNDDHSTDLAPFPPNEIYEPVDDVPFLIADQPQGFGEEDGTGKCRVITNDDVFEVNAGLFNVREFFGDGAFLVDTSSGIPVLTDEWGVTLLHHGANYYLVNGRHIVYQQLHVFFCVKLQFT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3472 415 ProSiteProfiles 'Homeobox' domain profile. 39 104 IPR001356 GO:0003677
Mal7g3472 415 MobiDBLite consensus disorder prediction 11 29 - -
Mal7g3472 415 MobiDBLite consensus disorder prediction 111 157 - -
Mal7g3472 415 SUPERFAMILY Homeodomain-like 37 104 IPR009057 -
Mal7g3472 415 CDD homeodomain 42 105 IPR001356 GO:0003677
Mal7g3472 415 SMART HOX_1 41 108 IPR001356 GO:0003677
Mal7g3472 415 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 394 IPR044557 GO:0003700|GO:0050793
Mal7g3472 415 MobiDBLite consensus disorder prediction 102 157 - -
Mal7g3472 415 MobiDBLite consensus disorder prediction 30 44 - -
Mal7g3472 415 Pfam Homeodomain 43 103 IPR001356 GO:0003677
Mal7g3472 415 MobiDBLite consensus disorder prediction 1 50 - -
Mal7g3472 415 Gene3D - 43 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3472 Mal-Chr7 99848697 99853705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3472 336 394 Wox Gene Family AT2G33880 49.180 1.06e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mal7g3472 Homeodomain 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3472 - - mtr:MTR_7g025010 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3472 7 99848697 99853705 Mal7g3472 7 99848697 99853705 ECH