Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3470 ATGACAAACAAGCCAGCATGTGCTCCTTGTAGACAGCAAAGGAAACGGTGCTTGAAAGAATGCATCCTTGCTCCTTATTATCCAGTGAAAAGGGATCAAGAATATGAAGCTGTTCACAAAGTTTTTGGTTACAAAAACATAGAAAAAATGCTCAAAAACCTTGATACACAAGGAAGAAAAAAAGCCATCGAGTCTTTTGATTGGGAAGCAAAGATGTGGAACCATGACCCAATCAATGGTCCACTTGGTGCATATATAGAAGCTGAGAAGAAAATCGTTGAACTTCAAAACCTTCTCCAACAACAACAACAACAACAACAAAATGTTGTTCCATTTTCTCAGTCCAAATTTATGAGCCTTACCCAAGATTCATGTTCTTTCAGTAATGATGCTGTACCTGTTTCAAACTATAGCAATTGGTCTTCTTTTGAGGCTAACAACAATGTTAACGTTGTACACAATGATCCCTATTTTGAATATCCTTATGAAGAAAATAGATTTGGAAGTGGAAGTGCTTGGCAAAATGAGGAACCAAATTTATTGAGCTGTGTTGTTGCTGGTGCTAATGTTTGGCAACCTTCACAACCTAATTATTTGCAAAGTGTTGCAAGTAGTTCTGGGACTAACGTGACTGTGGAGCAACATTCTCAATATTATGATCATAATATTATGACCAATCAAGAGATGGGAATGCAAGGAGAAGGTCAGCAGCATCCTAAGTATTATTCTTTTGGACAGCGTAAGGAAATCTTTCCCCTACCTCTGTCTCTTGTTGGAATTGATATTTGTGCACCATTTTATTTGGCATTTATTCGTTGA 819 0.3736 MTNKPACAPCRQQRKRCLKECILAPYYPVKRDQEYEAVHKVFGYKNIEKMLKNLDTQGRKKAIESFDWEAKMWNHDPINGPLGAYIEAEKKIVELQNLLQQQQQQQQNVVPFSQSKFMSLTQDSCSFSNDAVPVSNYSNWSSFEANNNVNVVHNDPYFEYPYEENRFGSGSAWQNEEPNLLSCVVAGANVWQPSQPNYLQSVASSSGTNVTVEQHSQYYDHNIMTNQEMGMQGEGQQHPKYYSFGQRKEIFPLPLSLVGIDICAPFYLAFIR* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3470 272 Coils Coil 85 108 - -
Mal7g3470 272 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Mal7g3470 272 PANTHER LOB DOMAIN-CONTAINING PROTEIN 5-RELATED 3 222 - -
Mal7g3470 272 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 222 - -
Mal7g3470 272 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3470 Mal-Chr7 99815459 99816277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3470 6 102 AS2 family AT1G06280 40.206 9.28e-23 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal7g3470 LOB 8.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3470 - - mtr:MTR_4g088035 358.607