Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3467 ATGGAGTCAGATCTGAGTTTTGCAGAAAAATTTCCTTATCTTTCTAGGGATCTCTCTGAAAATCCTTGCATAAAATCAGAGATCCCCACAATGATTCCTTCTCAACTAGGTTCAACTATTTCACTTCCACCATCACATTACACCACATTTTTGTACCAAAATCATTGCAATCAATTTAAGGAACACCCTCTGAACGAGGCTAACCATCATTCTAGTTTTCCTAGAGTGGCTCCTTCTTCCATCAGCCCATTCCCTATGATCTCAACCCCTTTGTACAAGGTTGCGCACACCAATGGATCCCAAAGAGAATTTCTCAATTCTCAAAATCCAATGATCTTTGCACCAAACTATAACAAAATGGAAGTCATGCATGGTCGTCTTAACTCTGGCAAAGGAATTTGGGATTTGTCTACAAAAAATCTATTTCATTATGGGGAAACTTCACAACCTCGAGTGAGTCCTGATATAATCAAGGGTCAATGGACTGCGAATGAGGATAGGGTTCTTGTTCAATTGGTGAATCACTTTGGGCTTAGAAAATGGTCTCATATTGCTAAGTATATGAAAGGCAGGATTGGAAAACAATGCAGAGAGAGATGGAATAACCATCTTCGGCCGGATATTAAGAAGGATTCATGGACTGAAGAGGAGGATAAAATACTAATTAAAGCTCACAAGACAGTTGGGAACAAATGGGCTGAAATTTCAAAGCGATTGCTAGGGCGCACCGAGAACTCCATCAAGAACCATTGGAACGCCACCAAGCGCCGCCAAAATGCTAAGAGGAAGAATCAGGGTAATAGTTCAAAGGGAATACTGCTTCTGAAATACATAATGGAAGTCACTAATGCTAAGAAAGCTGAAAAGAAGCTGGTGAAGAATTCTACGAGCATGACGAATATTGGGAATCAGTCGAATTTTGAAAGCTCTGAGAGTGATTTTAGCTCTAAAGATTTGGCTAATCCAGAGGAAGAAATTGATGGGTATGTTCCAATGATGGACCATCATGATGATGGAATGGCAAGGGGATCTGGCACCACAATGAGTTATGAGTTTGGGACATATGGAATGGAGTTTTTTCATGAGGTTCCTATGAAGCAGGAAATTGATCTCATGAATATGATCTATAAAAACCCTTAA 1140 0.3991 MESDLSFAEKFPYLSRDLSENPCIKSEIPTMIPSQLGSTISLPPSHYTTFLYQNHCNQFKEHPLNEANHHSSFPRVAPSSISPFPMISTPLYKVAHTNGSQREFLNSQNPMIFAPNYNKMEVMHGRLNSGKGIWDLSTKNLFHYGETSQPRVSPDIIKGQWTANEDRVLVQLVNHFGLRKWSHIAKYMKGRIGKQCRERWNNHLRPDIKKDSWTEEEDKILIKAHKTVGNKWAEISKRLLGRTENSIKNHWNATKRRQNAKRKNQGNSSKGILLLKYIMEVTNAKKAEKKLVKNSTSMTNIGNQSNFESSESDFSSKDLANPEEEIDGYVPMMDHHDDGMARGSGTTMSYEFGTYGMEFFHEVPMKQEIDLMNMIYKNP* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3467 379 PANTHER MYB PROTEIN-RELATED 139 305 - -
Mal7g3467 379 Pfam Myb-like DNA-binding domain 161 216 - -
Mal7g3467 379 Gene3D - 157 209 - -
Mal7g3467 379 SMART sant 157 206 IPR001005 -
Mal7g3467 379 SMART sant 209 257 IPR001005 -
Mal7g3467 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 208 IPR017930 -
Mal7g3467 379 ProSiteProfiles Myb-like domain profile. 205 255 IPR001005 -
Mal7g3467 379 CDD SANT 212 255 IPR001005 -
Mal7g3467 379 PANTHER MYB DOMAIN PROTEIN 100-RELATED 139 305 - -
Mal7g3467 379 ProSiteProfiles Myb-like domain profile. 153 204 IPR001005 -
Mal7g3467 379 CDD SANT 161 204 IPR001005 -
Mal7g3467 379 SUPERFAMILY Homeodomain-like 155 251 IPR009057 -
Mal7g3467 379 Gene3D - 211 264 - -
Mal7g3467 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 209 259 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3467 Mal-Chr7 99770275 99773832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3467 156 278 MYB Transcription Factor Family AT4G18770 70.732 6.00e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g3467 Myb_DNA-bind_6 6.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3467 K09422 - mtr:MTR_4g088015 514.227