Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3466 ATGGCTTTAAATTTCATCTCACAAACCGAGTTACCCCTTAATGAAAACGATTCACAAGACATGGTTATATACCAAATTCTCAACGAAGCCAATGAACTTAGCAACACAATGGTTCAACAGAGTCACCAAAATGGCCTAGAACAGAGCAAGAACATTAAAAAGAAGAACTACAGAGGCGTAAGGCGTCGACCATGGGGGAAATATGCAGCAGAGATTCGTGACTCGAAGCGAAATGGAGCTAGGATATGGCTTGGTACATTTCAAACAGCTGAAGAGGCTGCAATTGCTTATGATAAAGCTGCTTTCAGAATGAGGGGTGCTAAGGCCTTGTTGAATTTCCCACATGATTTTTCTGCTTCTATACAATTGAATTCAACTTCTAAGCGTGATTTGAGCTCAAGAAAAATCAACAATAAGGACTCTTAG 426 0.4014 MALNFISQTELPLNENDSQDMVIYQILNEANELSNTMVQQSHQNGLEQSKNIKKKNYRGVRRRPWGKYAAEIRDSKRNGARIWLGTFQTAEEAAIAYDKAAFRMRGAKALLNFPHDFSASIQLNSTSKRDLSSRKINNKDS* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3466 141 PANTHER DNA-BINDING DOMAIN 7 124 IPR044808 GO:0003700|GO:0009873
Mal7g3466 141 CDD AP2 55 116 IPR001471 GO:0003700|GO:0006355
Mal7g3466 141 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5 7 124 - -
Mal7g3466 141 ProSiteProfiles AP2/ERF domain profile. 56 114 IPR001471 GO:0003700|GO:0006355
Mal7g3466 141 SMART rav1_2 56 120 IPR001471 GO:0003700|GO:0006355
Mal7g3466 141 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
Mal7g3466 141 PRINTS Ethylene responsive element binding protein signature 57 68 IPR001471 GO:0003700|GO:0006355
Mal7g3466 141 SUPERFAMILY DNA-binding domain 56 116 IPR016177 GO:0003677
Mal7g3466 141 Pfam AP2 domain 56 106 IPR001471 GO:0003700|GO:0006355
Mal7g3466 141 Gene3D AP2/ERF domain 55 116 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3466 Mal-Chr7 99765140 99765565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3466 11 114 AP2-EREBP Transcription Factor Family AT5G47220 49.606 5.26e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal7g3466 AP2 3.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3466 K13433 - zju:107411165 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3466 7 99765140 99765565 Mal7g3466 7 99765140 99765565 ECH