Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3462 ATGACTTCTGGTTCTGGGCCCCATAATGAGAAGACCAATTCTGTTTTGGTAACCAACCTCCCATACCTCACAGGTTGCCGTTCCACAAATAACGGTGATTTGATGATGCTTTTCAGTCCTTATGGTGCGACCGATGCTCATGTTGCTGTTGATGAAATAGGCCTTCAAGGGAACTTTGGCTTTGTTAAATTTGGCACTAAGGAAGAAGCTCAAAAGGCTATTGATAAGGCTATTGATGGGGGGTTTGTCCACTGCAATTTCACCCTTGGAGTTGAATGGGTCACCCCAAAGACAACCTAA 300 0.4467 MTSGSGPHNEKTNSVLVTNLPYLTGCRSTNNGDLMMLFSPYGATDAHVAVDEIGLQGNFGFVKFGTKEEAQKAIDKAIDGGFVHCNFTLGVEWVTPKTT* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3462 99 Gene3D - 3 99 IPR012677 -
Mal7g3462 99 CDD RRM_SF 15 76 - -
Mal7g3462 99 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 96 IPR000504 GO:0003723
Mal7g3462 99 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 16 76 IPR000504 GO:0003723
Mal7g3462 99 SMART rrm1_1 14 92 IPR000504 GO:0003723
Mal7g3462 99 SUPERFAMILY RNA-binding domain, RBD 4 97 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3462 Mal-Chr7 99735143 99735442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3462 8 98 Eukaryotic Initiation Factors Gene Family AT5G06000 47.312 2.10e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3462 K13126 K12891 mpp:MICPUCDRAFT_60730 46.2098